Protein–RNA interactions for Protein: Q2M2D7

TBC1D28, TBC1 domain family member 28, humanhuman

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D28Q2M2D7 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
TBC1D28Q2M2D7 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TBC1D28Q2M2D7 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC22.53■■□□□ 1.2
TBC1D28Q2M2D7 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TBC1D28Q2M2D7 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
TBC1D28Q2M2D7 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
TBC1D28Q2M2D7 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TBC1D28Q2M2D7 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TBC1D28Q2M2D7 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TBC1D28Q2M2D7 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
TBC1D28Q2M2D7 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC22.5■■□□□ 1.19
TBC1D28Q2M2D7 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC22.5■■□□□ 1.19
TBC1D28Q2M2D7 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC22.5■■□□□ 1.19
TBC1D28Q2M2D7 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC22.5■■□□□ 1.19
TBC1D28Q2M2D7 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
TBC1D28Q2M2D7 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC22.5■■□□□ 1.19
TBC1D28Q2M2D7 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TBC1D28Q2M2D7 MLEC-202ENST00000412616 841 ntTSL 3 BASIC22.49■■□□□ 1.19
TBC1D28Q2M2D7 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC22.49■■□□□ 1.19
TBC1D28Q2M2D7 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
TBC1D28Q2M2D7 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
TBC1D28Q2M2D7 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
TBC1D28Q2M2D7 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC22.48■■□□□ 1.19
TBC1D28Q2M2D7 AC021231.2-201ENST00000594613 730 ntBASIC22.48■■□□□ 1.19
TBC1D28Q2M2D7 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
TBC1D28Q2M2D7 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
TBC1D28Q2M2D7 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
TBC1D28Q2M2D7 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TBC1D28Q2M2D7 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TBC1D28Q2M2D7 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TBC1D28Q2M2D7 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TBC1D28Q2M2D7 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
TBC1D28Q2M2D7 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
TBC1D28Q2M2D7 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
TBC1D28Q2M2D7 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
TBC1D28Q2M2D7 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
TBC1D28Q2M2D7 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
TBC1D28Q2M2D7 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
TBC1D28Q2M2D7 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
TBC1D28Q2M2D7 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
TBC1D28Q2M2D7 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC22.45■■□□□ 1.18
TBC1D28Q2M2D7 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC22.45■■□□□ 1.18
TBC1D28Q2M2D7 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
TBC1D28Q2M2D7 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
TBC1D28Q2M2D7 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC22.45■■□□□ 1.18
TBC1D28Q2M2D7 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
TBC1D28Q2M2D7 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC22.44■■□□□ 1.18
TBC1D28Q2M2D7 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
TBC1D28Q2M2D7 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
TBC1D28Q2M2D7 HGH1-207ENST00000628266 258 ntTSL 5 BASIC22.43■■□□□ 1.18
TBC1D28Q2M2D7 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
TBC1D28Q2M2D7 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
TBC1D28Q2M2D7 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
TBC1D28Q2M2D7 LINC00273-201ENST00000539813 1452 ntBASIC22.41■■□□□ 1.18
TBC1D28Q2M2D7 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
TBC1D28Q2M2D7 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
TBC1D28Q2M2D7 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
TBC1D28Q2M2D7 AL139393.2-201ENST00000608721 2025 ntBASIC22.41■■□□□ 1.18
TBC1D28Q2M2D7 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
TBC1D28Q2M2D7 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC22.41■■□□□ 1.18
TBC1D28Q2M2D7 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
TBC1D28Q2M2D7 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
TBC1D28Q2M2D7 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
TBC1D28Q2M2D7 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC22.4■■□□□ 1.18
TBC1D28Q2M2D7 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
TBC1D28Q2M2D7 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC22.4■■□□□ 1.18
TBC1D28Q2M2D7 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC22.4■■□□□ 1.18
TBC1D28Q2M2D7 ABCB10P3-201ENST00000561950 2166 ntBASIC22.4■■□□□ 1.18
TBC1D28Q2M2D7 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
TBC1D28Q2M2D7 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.17
TBC1D28Q2M2D7 CALM3-209ENST00000597743 577 ntTSL 4 BASIC22.39■■□□□ 1.17
TBC1D28Q2M2D7 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC22.39■■□□□ 1.17
TBC1D28Q2M2D7 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
TBC1D28Q2M2D7 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
TBC1D28Q2M2D7 AP004833.2-201ENST00000532228 1454 ntBASIC22.38■■□□□ 1.17
TBC1D28Q2M2D7 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC22.37■■□□□ 1.17
TBC1D28Q2M2D7 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC22.37■■□□□ 1.17
TBC1D28Q2M2D7 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC22.37■■□□□ 1.17
TBC1D28Q2M2D7 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
TBC1D28Q2M2D7 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
TBC1D28Q2M2D7 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC22.35■■□□□ 1.17
TBC1D28Q2M2D7 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
TBC1D28Q2M2D7 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC22.35■■□□□ 1.17
TBC1D28Q2M2D7 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC22.35■■□□□ 1.17
TBC1D28Q2M2D7 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC22.35■■□□□ 1.17
TBC1D28Q2M2D7 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC22.34■■□□□ 1.17
TBC1D28Q2M2D7 ABHD17AP4-201ENST00000411545 909 ntBASIC22.34■■□□□ 1.17
TBC1D28Q2M2D7 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC22.33■■□□□ 1.17
TBC1D28Q2M2D7 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
TBC1D28Q2M2D7 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
TBC1D28Q2M2D7 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
TBC1D28Q2M2D7 AC135983.2-203ENST00000454486 1613 ntBASIC22.33■■□□□ 1.17
TBC1D28Q2M2D7 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.16
TBC1D28Q2M2D7 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC22.32■■□□□ 1.16
TBC1D28Q2M2D7 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
TBC1D28Q2M2D7 ZNRF2P2-203ENST00000454624 420 ntBASIC22.32■■□□□ 1.16
TBC1D28Q2M2D7 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC22.31■■□□□ 1.16
TBC1D28Q2M2D7 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
TBC1D28Q2M2D7 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
TBC1D28Q2M2D7 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC22.3■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms