Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
URB1O60287 AC022413.1-201ENST00000624602 984 ntBASIC24.79■■□□□ 1.56
URB1O60287 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC24.79■■□□□ 1.56
URB1O60287 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
URB1O60287 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
URB1O60287 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
URB1O60287 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
URB1O60287 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC24.77■■□□□ 1.56
URB1O60287 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
URB1O60287 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC24.76■■□□□ 1.55
URB1O60287 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
URB1O60287 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC24.74■■□□□ 1.55
URB1O60287 RARRES2P1-201ENST00000474487 481 ntBASIC24.74■■□□□ 1.55
URB1O60287 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC24.73■■□□□ 1.55
URB1O60287 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
URB1O60287 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC24.72■■□□□ 1.55
URB1O60287 TSPY13P-201ENST00000338964 914 ntBASIC24.72■■□□□ 1.55
URB1O60287 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
URB1O60287 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
URB1O60287 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC24.72■■□□□ 1.55
URB1O60287 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
URB1O60287 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
URB1O60287 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
URB1O60287 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC24.7■■□□□ 1.54
URB1O60287 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC24.69■■□□□ 1.54
URB1O60287 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC24.69■■□□□ 1.54
URB1O60287 HYI-213ENST00000583037 1322 ntTSL 5 BASIC24.68■■□□□ 1.54
URB1O60287 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
URB1O60287 GFER-205ENST00000569451 517 ntTSL 5 BASIC24.67■■□□□ 1.54
URB1O60287 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
URB1O60287 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
URB1O60287 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC24.66■■□□□ 1.54
URB1O60287 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
URB1O60287 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
URB1O60287 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
URB1O60287 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC24.65■■□□□ 1.54
URB1O60287 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC24.65■■□□□ 1.54
URB1O60287 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC24.65■■□□□ 1.54
URB1O60287 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC24.65■■□□□ 1.54
URB1O60287 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
URB1O60287 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
URB1O60287 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
URB1O60287 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
URB1O60287 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC24.63■■□□□ 1.53
URB1O60287 KRT18P60-201ENST00000312876 1297 ntBASIC24.63■■□□□ 1.53
URB1O60287 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
URB1O60287 AL592295.1-201ENST00000400984 884 ntBASIC24.62■■□□□ 1.53
URB1O60287 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC24.62■■□□□ 1.53
URB1O60287 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
URB1O60287 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC24.61■■□□□ 1.53
URB1O60287 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
URB1O60287 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC24.61■■□□□ 1.53
URB1O60287 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC24.6■■□□□ 1.53
URB1O60287 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
URB1O60287 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
URB1O60287 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC24.59■■□□□ 1.53
URB1O60287 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC24.59■■□□□ 1.53
URB1O60287 AC019069.1-201ENST00000610008 1333 ntBASIC24.59■■□□□ 1.53
URB1O60287 LINC00273-201ENST00000539813 1452 ntBASIC24.59■■□□□ 1.53
URB1O60287 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
URB1O60287 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
URB1O60287 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
URB1O60287 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
URB1O60287 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC24.58■■□□□ 1.52
URB1O60287 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
URB1O60287 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC24.57■■□□□ 1.52
URB1O60287 AC004987.1-201ENST00000428627 508 ntBASIC24.56■■□□□ 1.52
URB1O60287 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
URB1O60287 U85056.1-201ENST00000616429 682 ntBASIC24.56■■□□□ 1.52
URB1O60287 ATP5G2P3-201ENST00000429083 425 ntBASIC24.55■■□□□ 1.52
URB1O60287 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
URB1O60287 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC24.55■■□□□ 1.52
URB1O60287 GUK1-208ENST00000366728 842 ntTSL 2 BASIC24.54■■□□□ 1.52
URB1O60287 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
URB1O60287 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
URB1O60287 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC24.53■■□□□ 1.52
URB1O60287 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC24.53■■□□□ 1.52
URB1O60287 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
URB1O60287 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
URB1O60287 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
URB1O60287 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC24.51■■□□□ 1.51
URB1O60287 AL035685.1-201ENST00000636663 812 ntBASIC24.51■■□□□ 1.51
URB1O60287 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC24.51■■□□□ 1.51
URB1O60287 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC24.51■■□□□ 1.51
URB1O60287 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC24.5■■□□□ 1.51
URB1O60287 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC24.5■■□□□ 1.51
URB1O60287 AC060814.1-201ENST00000554326 538 ntBASIC24.49■■□□□ 1.51
URB1O60287 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
URB1O60287 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
URB1O60287 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
URB1O60287 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC24.48■■□□□ 1.51
URB1O60287 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
URB1O60287 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
URB1O60287 MTURN-203ENST00000409688 843 ntTSL 2 BASIC24.47■■□□□ 1.51
URB1O60287 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC24.47■■□□□ 1.51
URB1O60287 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
URB1O60287 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
URB1O60287 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
URB1O60287 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC24.45■■□□□ 1.5
URB1O60287 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC24.45■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms