Protein–RNA interactions for Protein: A0A087WUM0

SYNJ2BP-COX16, SYNJ2BP-COX16 readthrough (Fragment), humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNJ2BP-COX16A0A087WUM0 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC27.16■■□□□ 1.94
SYNJ2BP-COX16A0A087WUM0 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC27.16■■□□□ 1.94
SYNJ2BP-COX16A0A087WUM0 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC27.16■■□□□ 1.94
SYNJ2BP-COX16A0A087WUM0 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC27.15■■□□□ 1.94
SYNJ2BP-COX16A0A087WUM0 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
SYNJ2BP-COX16A0A087WUM0 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC27.14■■□□□ 1.93
SYNJ2BP-COX16A0A087WUM0 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC27.13■■□□□ 1.93
SYNJ2BP-COX16A0A087WUM0 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
SYNJ2BP-COX16A0A087WUM0 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC27.13■■□□□ 1.93
SYNJ2BP-COX16A0A087WUM0 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC27.12■■□□□ 1.93
SYNJ2BP-COX16A0A087WUM0 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC27.12■■□□□ 1.93
SYNJ2BP-COX16A0A087WUM0 DUX4L29-201ENST00000425409 679 ntBASIC27.12■■□□□ 1.93
SYNJ2BP-COX16A0A087WUM0 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC27.12■■□□□ 1.93
SYNJ2BP-COX16A0A087WUM0 AC021231.2-201ENST00000594613 730 ntBASIC27.11■■□□□ 1.93
SYNJ2BP-COX16A0A087WUM0 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
SYNJ2BP-COX16A0A087WUM0 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
SYNJ2BP-COX16A0A087WUM0 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
SYNJ2BP-COX16A0A087WUM0 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC27.09■■□□□ 1.93
SYNJ2BP-COX16A0A087WUM0 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC27.09■■□□□ 1.93
SYNJ2BP-COX16A0A087WUM0 ABCB10P3-201ENST00000561950 2166 ntBASIC27.09■■□□□ 1.93
SYNJ2BP-COX16A0A087WUM0 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC27.09■■□□□ 1.93
SYNJ2BP-COX16A0A087WUM0 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC27.09■■□□□ 1.93
SYNJ2BP-COX16A0A087WUM0 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC27.09■■□□□ 1.93
SYNJ2BP-COX16A0A087WUM0 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC27.09■■□□□ 1.93
SYNJ2BP-COX16A0A087WUM0 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
SYNJ2BP-COX16A0A087WUM0 EI24-212ENST00000615917 1407 ntTSL 2 BASIC27.08■■□□□ 1.93
SYNJ2BP-COX16A0A087WUM0 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
SYNJ2BP-COX16A0A087WUM0 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
SYNJ2BP-COX16A0A087WUM0 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
SYNJ2BP-COX16A0A087WUM0 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC27.08■■□□□ 1.93
SYNJ2BP-COX16A0A087WUM0 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC27.08■■□□□ 1.93
SYNJ2BP-COX16A0A087WUM0 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC27.07■■□□□ 1.92
SYNJ2BP-COX16A0A087WUM0 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
SYNJ2BP-COX16A0A087WUM0 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
SYNJ2BP-COX16A0A087WUM0 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
SYNJ2BP-COX16A0A087WUM0 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC27.06■■□□□ 1.92
SYNJ2BP-COX16A0A087WUM0 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC27.06■■□□□ 1.92
SYNJ2BP-COX16A0A087WUM0 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC27.06■■□□□ 1.92
SYNJ2BP-COX16A0A087WUM0 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
SYNJ2BP-COX16A0A087WUM0 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
SYNJ2BP-COX16A0A087WUM0 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
SYNJ2BP-COX16A0A087WUM0 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
SYNJ2BP-COX16A0A087WUM0 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC27.05■■□□□ 1.92
SYNJ2BP-COX16A0A087WUM0 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
SYNJ2BP-COX16A0A087WUM0 HGH1-207ENST00000628266 258 ntTSL 5 BASIC27.04■■□□□ 1.92
SYNJ2BP-COX16A0A087WUM0 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
SYNJ2BP-COX16A0A087WUM0 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
SYNJ2BP-COX16A0A087WUM0 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC27.02■■□□□ 1.92
SYNJ2BP-COX16A0A087WUM0 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC27.02■■□□□ 1.92
SYNJ2BP-COX16A0A087WUM0 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
SYNJ2BP-COX16A0A087WUM0 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC27.02■■□□□ 1.92
SYNJ2BP-COX16A0A087WUM0 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC27.02■■□□□ 1.92
SYNJ2BP-COX16A0A087WUM0 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC27.02■■□□□ 1.92
SYNJ2BP-COX16A0A087WUM0 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
SYNJ2BP-COX16A0A087WUM0 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
SYNJ2BP-COX16A0A087WUM0 MLEC-202ENST00000412616 841 ntTSL 3 BASIC27.01■■□□□ 1.91
SYNJ2BP-COX16A0A087WUM0 AL139393.2-201ENST00000608721 2025 ntBASIC27■■□□□ 1.91
SYNJ2BP-COX16A0A087WUM0 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC27■■□□□ 1.91
SYNJ2BP-COX16A0A087WUM0 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC27■■□□□ 1.91
SYNJ2BP-COX16A0A087WUM0 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC27■■□□□ 1.91
SYNJ2BP-COX16A0A087WUM0 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
SYNJ2BP-COX16A0A087WUM0 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC27■■□□□ 1.91
SYNJ2BP-COX16A0A087WUM0 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC27■■□□□ 1.91
SYNJ2BP-COX16A0A087WUM0 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC26.99■■□□□ 1.91
SYNJ2BP-COX16A0A087WUM0 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
SYNJ2BP-COX16A0A087WUM0 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC26.99■■□□□ 1.91
SYNJ2BP-COX16A0A087WUM0 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC26.99■■□□□ 1.91
SYNJ2BP-COX16A0A087WUM0 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC26.99■■□□□ 1.91
SYNJ2BP-COX16A0A087WUM0 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
SYNJ2BP-COX16A0A087WUM0 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
SYNJ2BP-COX16A0A087WUM0 ABHD17AP4-201ENST00000411545 909 ntBASIC26.97■■□□□ 1.91
SYNJ2BP-COX16A0A087WUM0 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
SYNJ2BP-COX16A0A087WUM0 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC26.96■■□□□ 1.91
SYNJ2BP-COX16A0A087WUM0 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC26.95■■□□□ 1.91
SYNJ2BP-COX16A0A087WUM0 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC26.95■■□□□ 1.91
SYNJ2BP-COX16A0A087WUM0 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC26.95■■□□□ 1.9
SYNJ2BP-COX16A0A087WUM0 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
SYNJ2BP-COX16A0A087WUM0 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
SYNJ2BP-COX16A0A087WUM0 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC26.93■■□□□ 1.9
SYNJ2BP-COX16A0A087WUM0 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
SYNJ2BP-COX16A0A087WUM0 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
SYNJ2BP-COX16A0A087WUM0 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
SYNJ2BP-COX16A0A087WUM0 ZNRF2P2-203ENST00000454624 420 ntBASIC26.92■■□□□ 1.9
SYNJ2BP-COX16A0A087WUM0 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC26.92■■□□□ 1.9
SYNJ2BP-COX16A0A087WUM0 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC26.92■■□□□ 1.9
SYNJ2BP-COX16A0A087WUM0 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC26.91■■□□□ 1.9
SYNJ2BP-COX16A0A087WUM0 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC26.91■■□□□ 1.9
SYNJ2BP-COX16A0A087WUM0 CALM3-209ENST00000597743 577 ntTSL 4 BASIC26.91■■□□□ 1.9
SYNJ2BP-COX16A0A087WUM0 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC26.91■■□□□ 1.9
SYNJ2BP-COX16A0A087WUM0 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC26.91■■□□□ 1.9
SYNJ2BP-COX16A0A087WUM0 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC26.91■■□□□ 1.9
SYNJ2BP-COX16A0A087WUM0 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC26.91■■□□□ 1.9
SYNJ2BP-COX16A0A087WUM0 LINC00273-201ENST00000539813 1452 ntBASIC26.9■■□□□ 1.9
SYNJ2BP-COX16A0A087WUM0 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
SYNJ2BP-COX16A0A087WUM0 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC26.89■■□□□ 1.89
SYNJ2BP-COX16A0A087WUM0 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC26.89■■□□□ 1.89
SYNJ2BP-COX16A0A087WUM0 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
SYNJ2BP-COX16A0A087WUM0 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC26.87■■□□□ 1.89
SYNJ2BP-COX16A0A087WUM0 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC26.87■■□□□ 1.89
SYNJ2BP-COX16A0A087WUM0 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC26.87■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 12.4 ms