Protein–RNA interactions for Protein: Q9Y5G5

PCDHGA8, Protocadherin gamma-A8, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA8Q9Y5G5 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
PCDHGA8Q9Y5G5 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC25.69■■□□□ 1.7
PCDHGA8Q9Y5G5 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
PCDHGA8Q9Y5G5 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
PCDHGA8Q9Y5G5 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
PCDHGA8Q9Y5G5 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
PCDHGA8Q9Y5G5 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
PCDHGA8Q9Y5G5 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC25.67■■□□□ 1.7
PCDHGA8Q9Y5G5 RNF166-209ENST00000567844 633 ntTSL 5 BASIC25.67■■□□□ 1.7
PCDHGA8Q9Y5G5 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC25.66■■□□□ 1.7
PCDHGA8Q9Y5G5 MIR3648-2-201ENST00000581792 180 ntBASIC25.66■■□□□ 1.7
PCDHGA8Q9Y5G5 MIR3648-1-201ENST00000615959 180 ntBASIC25.66■■□□□ 1.7
PCDHGA8Q9Y5G5 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
PCDHGA8Q9Y5G5 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
PCDHGA8Q9Y5G5 MIR6090-201ENST00000622481 60 ntBASIC25.65■■□□□ 1.7
PCDHGA8Q9Y5G5 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
PCDHGA8Q9Y5G5 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC25.64■■□□□ 1.7
PCDHGA8Q9Y5G5 GDI1-215ENST00000630693 786 ntTSL 4 BASIC25.63■■□□□ 1.69
PCDHGA8Q9Y5G5 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
PCDHGA8Q9Y5G5 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
PCDHGA8Q9Y5G5 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
PCDHGA8Q9Y5G5 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
PCDHGA8Q9Y5G5 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
PCDHGA8Q9Y5G5 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC25.62■■□□□ 1.69
PCDHGA8Q9Y5G5 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
PCDHGA8Q9Y5G5 AGPS-202ENST00000409888 815 ntTSL 4 BASIC25.62■■□□□ 1.69
PCDHGA8Q9Y5G5 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC25.62■■□□□ 1.69
PCDHGA8Q9Y5G5 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
PCDHGA8Q9Y5G5 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
PCDHGA8Q9Y5G5 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC25.61■■□□□ 1.69
PCDHGA8Q9Y5G5 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
PCDHGA8Q9Y5G5 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC25.61■■□□□ 1.69
PCDHGA8Q9Y5G5 CALM3-209ENST00000597743 577 ntTSL 4 BASIC25.61■■□□□ 1.69
PCDHGA8Q9Y5G5 AC016575.1-201ENST00000607026 382 ntBASIC25.61■■□□□ 1.69
PCDHGA8Q9Y5G5 LINC01971-201ENST00000617888 1048 ntBASIC25.61■■□□□ 1.69
PCDHGA8Q9Y5G5 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
PCDHGA8Q9Y5G5 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC25.6■■□□□ 1.69
PCDHGA8Q9Y5G5 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC25.6■■□□□ 1.69
PCDHGA8Q9Y5G5 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
PCDHGA8Q9Y5G5 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC25.6■■□□□ 1.69
PCDHGA8Q9Y5G5 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC25.59■■□□□ 1.69
PCDHGA8Q9Y5G5 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
PCDHGA8Q9Y5G5 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
PCDHGA8Q9Y5G5 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC25.57■■□□□ 1.68
PCDHGA8Q9Y5G5 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC25.57■■□□□ 1.68
PCDHGA8Q9Y5G5 DUX4L11-201ENST00000611504 1267 ntBASIC25.57■■□□□ 1.68
PCDHGA8Q9Y5G5 DUX4L12-201ENST00000614593 1267 ntBASIC25.57■■□□□ 1.68
PCDHGA8Q9Y5G5 DUX4L14-201ENST00000621227 1267 ntBASIC25.57■■□□□ 1.68
PCDHGA8Q9Y5G5 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC25.57■■□□□ 1.68
PCDHGA8Q9Y5G5 ABCB10P3-201ENST00000561950 2166 ntBASIC25.56■■□□□ 1.68
PCDHGA8Q9Y5G5 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC25.56■■□□□ 1.68
PCDHGA8Q9Y5G5 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
PCDHGA8Q9Y5G5 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
PCDHGA8Q9Y5G5 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC25.55■■□□□ 1.68
PCDHGA8Q9Y5G5 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
PCDHGA8Q9Y5G5 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC25.54■■□□□ 1.68
PCDHGA8Q9Y5G5 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
PCDHGA8Q9Y5G5 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
PCDHGA8Q9Y5G5 CR559946.2-201ENST00000623684 991 ntBASIC25.53■■□□□ 1.68
PCDHGA8Q9Y5G5 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
PCDHGA8Q9Y5G5 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
PCDHGA8Q9Y5G5 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
PCDHGA8Q9Y5G5 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC25.51■■□□□ 1.67
PCDHGA8Q9Y5G5 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
PCDHGA8Q9Y5G5 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC25.51■■□□□ 1.67
PCDHGA8Q9Y5G5 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
PCDHGA8Q9Y5G5 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
PCDHGA8Q9Y5G5 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC25.51■■□□□ 1.67
PCDHGA8Q9Y5G5 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
PCDHGA8Q9Y5G5 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
PCDHGA8Q9Y5G5 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
PCDHGA8Q9Y5G5 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC25.5■■□□□ 1.67
PCDHGA8Q9Y5G5 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
PCDHGA8Q9Y5G5 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
PCDHGA8Q9Y5G5 HSD17B1P1-201ENST00000590052 955 ntBASIC25.5■■□□□ 1.67
PCDHGA8Q9Y5G5 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
PCDHGA8Q9Y5G5 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
PCDHGA8Q9Y5G5 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
PCDHGA8Q9Y5G5 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC25.49■■□□□ 1.67
PCDHGA8Q9Y5G5 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC25.49■■□□□ 1.67
PCDHGA8Q9Y5G5 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
PCDHGA8Q9Y5G5 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC25.49■■□□□ 1.67
PCDHGA8Q9Y5G5 SHF-206ENST00000560471 2499 ntTSL 5 BASIC25.48■■□□□ 1.67
PCDHGA8Q9Y5G5 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
PCDHGA8Q9Y5G5 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
PCDHGA8Q9Y5G5 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
PCDHGA8Q9Y5G5 AC120057.4-201ENST00000624722 1615 ntBASIC25.48■■□□□ 1.67
PCDHGA8Q9Y5G5 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC25.47■■□□□ 1.67
PCDHGA8Q9Y5G5 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
PCDHGA8Q9Y5G5 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
PCDHGA8Q9Y5G5 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
PCDHGA8Q9Y5G5 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
PCDHGA8Q9Y5G5 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC25.46■■□□□ 1.67
PCDHGA8Q9Y5G5 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC25.46■■□□□ 1.67
PCDHGA8Q9Y5G5 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC25.46■■□□□ 1.67
PCDHGA8Q9Y5G5 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
PCDHGA8Q9Y5G5 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC25.44■■□□□ 1.66
PCDHGA8Q9Y5G5 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC25.44■■□□□ 1.66
PCDHGA8Q9Y5G5 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC25.43■■□□□ 1.66
PCDHGA8Q9Y5G5 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms