Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
PCDHGB4Q9UN71 AL133380.1-201ENST00000506013 324 ntBASIC25.17■■□□□ 1.62
PCDHGB4Q9UN71 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
PCDHGB4Q9UN71 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
PCDHGB4Q9UN71 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC25.15■■□□□ 1.62
PCDHGB4Q9UN71 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
PCDHGB4Q9UN71 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
PCDHGB4Q9UN71 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC25.14■■□□□ 1.62
PCDHGB4Q9UN71 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC25.14■■□□□ 1.61
PCDHGB4Q9UN71 AL135925.1-201ENST00000605920 1701 ntBASIC25.14■■□□□ 1.61
PCDHGB4Q9UN71 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC25.13■■□□□ 1.61
PCDHGB4Q9UN71 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
PCDHGB4Q9UN71 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
PCDHGB4Q9UN71 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
PCDHGB4Q9UN71 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC25.11■■□□□ 1.61
PCDHGB4Q9UN71 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
PCDHGB4Q9UN71 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC25.1■■□□□ 1.61
PCDHGB4Q9UN71 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC25.1■■□□□ 1.61
PCDHGB4Q9UN71 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PCDHGB4Q9UN71 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
PCDHGB4Q9UN71 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC25.09■■□□□ 1.61
PCDHGB4Q9UN71 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC25.09■■□□□ 1.61
PCDHGB4Q9UN71 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
PCDHGB4Q9UN71 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
PCDHGB4Q9UN71 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
PCDHGB4Q9UN71 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC25.08■■□□□ 1.61
PCDHGB4Q9UN71 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
PCDHGB4Q9UN71 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC25.08■■□□□ 1.61
PCDHGB4Q9UN71 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC25.07■■□□□ 1.6
PCDHGB4Q9UN71 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
PCDHGB4Q9UN71 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
PCDHGB4Q9UN71 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
PCDHGB4Q9UN71 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC25.06■■□□□ 1.6
PCDHGB4Q9UN71 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
PCDHGB4Q9UN71 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC25.05■■□□□ 1.6
PCDHGB4Q9UN71 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
PCDHGB4Q9UN71 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
PCDHGB4Q9UN71 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
PCDHGB4Q9UN71 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC25.04■■□□□ 1.6
PCDHGB4Q9UN71 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
PCDHGB4Q9UN71 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
PCDHGB4Q9UN71 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
PCDHGB4Q9UN71 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC25.04■■□□□ 1.6
PCDHGB4Q9UN71 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC25.03■■□□□ 1.6
PCDHGB4Q9UN71 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC25.03■■□□□ 1.6
PCDHGB4Q9UN71 RARRES2P7-201ENST00000567349 469 ntBASIC25.03■■□□□ 1.6
PCDHGB4Q9UN71 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC25.02■■□□□ 1.6
PCDHGB4Q9UN71 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
PCDHGB4Q9UN71 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
PCDHGB4Q9UN71 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC25.01■■□□□ 1.59
PCDHGB4Q9UN71 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
PCDHGB4Q9UN71 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
PCDHGB4Q9UN71 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC25.01■■□□□ 1.59
PCDHGB4Q9UN71 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
PCDHGB4Q9UN71 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC25.01■■□□□ 1.59
PCDHGB4Q9UN71 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC25.01■■□□□ 1.59
PCDHGB4Q9UN71 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
PCDHGB4Q9UN71 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC25■■□□□ 1.59
PCDHGB4Q9UN71 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC25■■□□□ 1.59
PCDHGB4Q9UN71 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC25■■□□□ 1.59
PCDHGB4Q9UN71 AC142086.6-201ENST00000621154 1765 ntBASIC25■■□□□ 1.59
PCDHGB4Q9UN71 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
PCDHGB4Q9UN71 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC24.99■■□□□ 1.59
PCDHGB4Q9UN71 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
PCDHGB4Q9UN71 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC24.98■■□□□ 1.59
PCDHGB4Q9UN71 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
PCDHGB4Q9UN71 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
PCDHGB4Q9UN71 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
PCDHGB4Q9UN71 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC24.97■■□□□ 1.59
PCDHGB4Q9UN71 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
PCDHGB4Q9UN71 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
PCDHGB4Q9UN71 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
PCDHGB4Q9UN71 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
PCDHGB4Q9UN71 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
PCDHGB4Q9UN71 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
PCDHGB4Q9UN71 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
PCDHGB4Q9UN71 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC24.94■■□□□ 1.58
PCDHGB4Q9UN71 SETD8P1-201ENST00000623146 1180 ntBASIC24.94■■□□□ 1.58
PCDHGB4Q9UN71 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
PCDHGB4Q9UN71 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
PCDHGB4Q9UN71 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
PCDHGB4Q9UN71 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC24.93■■□□□ 1.58
PCDHGB4Q9UN71 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
PCDHGB4Q9UN71 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
PCDHGB4Q9UN71 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
PCDHGB4Q9UN71 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
PCDHGB4Q9UN71 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
PCDHGB4Q9UN71 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
PCDHGB4Q9UN71 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC24.9■■□□□ 1.58
PCDHGB4Q9UN71 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
PCDHGB4Q9UN71 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC24.9■■□□□ 1.58
PCDHGB4Q9UN71 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC24.89■■□□□ 1.58
PCDHGB4Q9UN71 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
PCDHGB4Q9UN71 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC24.89■■□□□ 1.57
PCDHGB4Q9UN71 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
PCDHGB4Q9UN71 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
PCDHGB4Q9UN71 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC24.88■■□□□ 1.57
PCDHGB4Q9UN71 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC24.88■■□□□ 1.57
PCDHGB4Q9UN71 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
PCDHGB4Q9UN71 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms