Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC27.92■■■□□ 2.06
PCDHGC3Q9UN70 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC27.92■■■□□ 2.06
PCDHGC3Q9UN70 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC27.92■■■□□ 2.06
PCDHGC3Q9UN70 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
PCDHGC3Q9UN70 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
PCDHGC3Q9UN70 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC27.91■■■□□ 2.06
PCDHGC3Q9UN70 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
PCDHGC3Q9UN70 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC27.9■■■□□ 2.06
PCDHGC3Q9UN70 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.05
PCDHGC3Q9UN70 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC27.88■■■□□ 2.05
PCDHGC3Q9UN70 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC27.88■■■□□ 2.05
PCDHGC3Q9UN70 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC27.86■■■□□ 2.05
PCDHGC3Q9UN70 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
PCDHGC3Q9UN70 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
PCDHGC3Q9UN70 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC27.86■■■□□ 2.05
PCDHGC3Q9UN70 RPS2-209ENST00000529806 993 ntTSL 3 BASIC27.86■■■□□ 2.05
PCDHGC3Q9UN70 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC27.86■■■□□ 2.05
PCDHGC3Q9UN70 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
PCDHGC3Q9UN70 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
PCDHGC3Q9UN70 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
PCDHGC3Q9UN70 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
PCDHGC3Q9UN70 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC27.85■■■□□ 2.05
PCDHGC3Q9UN70 AP006261.1-201ENST00000584783 668 ntBASIC27.85■■■□□ 2.05
PCDHGC3Q9UN70 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
PCDHGC3Q9UN70 DUX4L28-201ENST00000623687 678 ntBASIC27.85■■■□□ 2.05
PCDHGC3Q9UN70 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
PCDHGC3Q9UN70 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
PCDHGC3Q9UN70 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC27.85■■■□□ 2.05
PCDHGC3Q9UN70 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC27.84■■■□□ 2.05
PCDHGC3Q9UN70 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
PCDHGC3Q9UN70 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
PCDHGC3Q9UN70 ABCB10P3-201ENST00000561950 2166 ntBASIC27.84■■■□□ 2.05
PCDHGC3Q9UN70 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC27.84■■■□□ 2.05
PCDHGC3Q9UN70 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
PCDHGC3Q9UN70 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC27.83■■■□□ 2.05
PCDHGC3Q9UN70 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC27.83■■■□□ 2.05
PCDHGC3Q9UN70 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
PCDHGC3Q9UN70 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
PCDHGC3Q9UN70 MIR3665-201ENST00000578708 105 ntBASIC27.82■■■□□ 2.04
PCDHGC3Q9UN70 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC27.81■■■□□ 2.04
PCDHGC3Q9UN70 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC27.81■■■□□ 2.04
PCDHGC3Q9UN70 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC27.81■■■□□ 2.04
PCDHGC3Q9UN70 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
PCDHGC3Q9UN70 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC27.81■■■□□ 2.04
PCDHGC3Q9UN70 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC27.8■■■□□ 2.04
PCDHGC3Q9UN70 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC27.8■■■□□ 2.04
PCDHGC3Q9UN70 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
PCDHGC3Q9UN70 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
PCDHGC3Q9UN70 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC27.79■■■□□ 2.04
PCDHGC3Q9UN70 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC27.79■■■□□ 2.04
PCDHGC3Q9UN70 NRG1-221ENST00000614767 762 ntTSL 5 BASIC27.79■■■□□ 2.04
PCDHGC3Q9UN70 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
PCDHGC3Q9UN70 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC27.76■■■□□ 2.03
PCDHGC3Q9UN70 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
PCDHGC3Q9UN70 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC27.75■■■□□ 2.03
PCDHGC3Q9UN70 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC27.75■■■□□ 2.03
PCDHGC3Q9UN70 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC27.75■■■□□ 2.03
PCDHGC3Q9UN70 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
PCDHGC3Q9UN70 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
PCDHGC3Q9UN70 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC27.73■■■□□ 2.03
PCDHGC3Q9UN70 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
PCDHGC3Q9UN70 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC27.73■■■□□ 2.03
PCDHGC3Q9UN70 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC27.73■■■□□ 2.03
PCDHGC3Q9UN70 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC27.73■■■□□ 2.03
PCDHGC3Q9UN70 AL162393.1-201ENST00000437852 946 ntBASIC27.73■■■□□ 2.03
PCDHGC3Q9UN70 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC27.73■■■□□ 2.03
PCDHGC3Q9UN70 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC27.72■■■□□ 2.03
PCDHGC3Q9UN70 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC27.71■■■□□ 2.03
PCDHGC3Q9UN70 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC27.71■■■□□ 2.03
PCDHGC3Q9UN70 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
PCDHGC3Q9UN70 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
PCDHGC3Q9UN70 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC27.7■■■□□ 2.02
PCDHGC3Q9UN70 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
PCDHGC3Q9UN70 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC27.69■■■□□ 2.02
PCDHGC3Q9UN70 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC27.69■■■□□ 2.02
PCDHGC3Q9UN70 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC27.69■■■□□ 2.02
PCDHGC3Q9UN70 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC27.68■■■□□ 2.02
PCDHGC3Q9UN70 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC27.68■■■□□ 2.02
PCDHGC3Q9UN70 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
PCDHGC3Q9UN70 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
PCDHGC3Q9UN70 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC27.67■■■□□ 2.02
PCDHGC3Q9UN70 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
PCDHGC3Q9UN70 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC27.67■■■□□ 2.02
PCDHGC3Q9UN70 AC087741.3-201ENST00000624270 1347 ntBASIC27.67■■■□□ 2.02
PCDHGC3Q9UN70 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC27.66■■■□□ 2.02
PCDHGC3Q9UN70 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
PCDHGC3Q9UN70 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC27.66■■■□□ 2.02
PCDHGC3Q9UN70 AL139393.2-201ENST00000608721 2025 ntBASIC27.65■■■□□ 2.02
PCDHGC3Q9UN70 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
PCDHGC3Q9UN70 AC139426.1-201ENST00000568218 2529 ntBASIC27.65■■■□□ 2.02
PCDHGC3Q9UN70 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC27.65■■■□□ 2.02
PCDHGC3Q9UN70 AC108673.1-201ENST00000510422 1159 ntBASIC27.64■■■□□ 2.02
PCDHGC3Q9UN70 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
PCDHGC3Q9UN70 AC127502.1-201ENST00000399971 1502 ntBASIC27.62■■■□□ 2.01
PCDHGC3Q9UN70 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC27.62■■■□□ 2.01
PCDHGC3Q9UN70 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
PCDHGC3Q9UN70 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC27.61■■■□□ 2.01
PCDHGC3Q9UN70 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC27.61■■■□□ 2.01
PCDHGC3Q9UN70 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC27.6■■■□□ 2.01
PCDHGC3Q9UN70 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms