Protein–RNA interactions for Protein: Q9HCC6

HES4, Transcription factor HES-4, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HES4Q9HCC6 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC22.2■■□□□ 1.14
HES4Q9HCC6 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
HES4Q9HCC6 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
HES4Q9HCC6 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
HES4Q9HCC6 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
HES4Q9HCC6 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
HES4Q9HCC6 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC22.18■■□□□ 1.14
HES4Q9HCC6 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
HES4Q9HCC6 MIR762-201ENST00000390236 83 ntBASIC22.17■■□□□ 1.14
HES4Q9HCC6 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC22.16■■□□□ 1.14
HES4Q9HCC6 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
HES4Q9HCC6 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC22.16■■□□□ 1.14
HES4Q9HCC6 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
HES4Q9HCC6 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
HES4Q9HCC6 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC22.15■■□□□ 1.14
HES4Q9HCC6 CHML-205ENST00000638160 705 ntTSL 3 BASIC22.15■■□□□ 1.14
HES4Q9HCC6 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
HES4Q9HCC6 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
HES4Q9HCC6 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
HES4Q9HCC6 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
HES4Q9HCC6 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
HES4Q9HCC6 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
HES4Q9HCC6 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
HES4Q9HCC6 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
HES4Q9HCC6 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
HES4Q9HCC6 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC22.13■■□□□ 1.13
HES4Q9HCC6 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
HES4Q9HCC6 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC22.13■■□□□ 1.13
HES4Q9HCC6 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
HES4Q9HCC6 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
HES4Q9HCC6 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC22.12■■□□□ 1.13
HES4Q9HCC6 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
HES4Q9HCC6 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
HES4Q9HCC6 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
HES4Q9HCC6 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
HES4Q9HCC6 HNRNPLP2-201ENST00000568980 1570 ntBASIC22.11■■□□□ 1.13
HES4Q9HCC6 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
HES4Q9HCC6 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
HES4Q9HCC6 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC22.1■■□□□ 1.13
HES4Q9HCC6 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
HES4Q9HCC6 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
HES4Q9HCC6 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC22.09■■□□□ 1.13
HES4Q9HCC6 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC22.09■■□□□ 1.13
HES4Q9HCC6 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
HES4Q9HCC6 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
HES4Q9HCC6 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
HES4Q9HCC6 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
HES4Q9HCC6 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
HES4Q9HCC6 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
HES4Q9HCC6 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
HES4Q9HCC6 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC22.08■■□□□ 1.12
HES4Q9HCC6 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
HES4Q9HCC6 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
HES4Q9HCC6 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
HES4Q9HCC6 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
HES4Q9HCC6 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
HES4Q9HCC6 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
HES4Q9HCC6 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
HES4Q9HCC6 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC22.04■■□□□ 1.12
HES4Q9HCC6 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
HES4Q9HCC6 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
HES4Q9HCC6 AC005559.1-201ENST00000589661 871 ntBASIC22.04■■□□□ 1.12
HES4Q9HCC6 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
HES4Q9HCC6 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC22.03■■□□□ 1.12
HES4Q9HCC6 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC22.03■■□□□ 1.12
HES4Q9HCC6 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
HES4Q9HCC6 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
HES4Q9HCC6 AC139426.1-201ENST00000568218 2529 ntBASIC22.03■■□□□ 1.12
HES4Q9HCC6 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
HES4Q9HCC6 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
HES4Q9HCC6 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
HES4Q9HCC6 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
HES4Q9HCC6 RPS2-209ENST00000529806 993 ntTSL 3 BASIC22.01■■□□□ 1.11
HES4Q9HCC6 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC22.01■■□□□ 1.11
HES4Q9HCC6 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
HES4Q9HCC6 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
HES4Q9HCC6 AL139393.2-201ENST00000608721 2025 ntBASIC21.99■■□□□ 1.11
HES4Q9HCC6 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC21.99■■□□□ 1.11
HES4Q9HCC6 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC21.99■■□□□ 1.11
HES4Q9HCC6 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
HES4Q9HCC6 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC21.97■■□□□ 1.11
HES4Q9HCC6 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
HES4Q9HCC6 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
HES4Q9HCC6 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC21.97■■□□□ 1.11
HES4Q9HCC6 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
HES4Q9HCC6 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
HES4Q9HCC6 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
HES4Q9HCC6 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
HES4Q9HCC6 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
HES4Q9HCC6 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC21.96■■□□□ 1.11
HES4Q9HCC6 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
HES4Q9HCC6 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC21.95■■□□□ 1.1
HES4Q9HCC6 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC21.95■■□□□ 1.1
HES4Q9HCC6 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC21.95■■□□□ 1.1
HES4Q9HCC6 DUX4L28-201ENST00000623687 678 ntBASIC21.95■■□□□ 1.1
HES4Q9HCC6 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
HES4Q9HCC6 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HES4Q9HCC6 AP006261.1-201ENST00000584783 668 ntBASIC21.94■■□□□ 1.1
HES4Q9HCC6 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
HES4Q9HCC6 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC21.94■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms