Protein–RNA interactions for Protein: Q9HCC6

HES4, Transcription factor HES-4, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HES4Q9HCC6 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC28.6■■■□□ 2.17
HES4Q9HCC6 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
HES4Q9HCC6 AL356512.1-201ENST00000607453 1739 ntBASIC28.01■■■□□ 2.07
HES4Q9HCC6 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC27.91■■■□□ 2.06
HES4Q9HCC6 HES6-203ENST00000409160 1600 ntTSL 2 BASIC27.79■■■□□ 2.04
HES4Q9HCC6 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
HES4Q9HCC6 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
HES4Q9HCC6 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC27.57■■■□□ 2
HES4Q9HCC6 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC27.5■■□□□ 1.99
HES4Q9HCC6 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC27.23■■□□□ 1.95
HES4Q9HCC6 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC27.21■■□□□ 1.95
HES4Q9HCC6 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC27.2■■□□□ 1.94
HES4Q9HCC6 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC27.11■■□□□ 1.93
HES4Q9HCC6 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
HES4Q9HCC6 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC26.76■■□□□ 1.87
HES4Q9HCC6 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC26.67■■□□□ 1.86
HES4Q9HCC6 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC26.59■■□□□ 1.85
HES4Q9HCC6 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
HES4Q9HCC6 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC26.41■■□□□ 1.82
HES4Q9HCC6 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC26.4■■□□□ 1.82
HES4Q9HCC6 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC26.38■■□□□ 1.81
HES4Q9HCC6 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
HES4Q9HCC6 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC26.25■■□□□ 1.79
HES4Q9HCC6 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
HES4Q9HCC6 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
HES4Q9HCC6 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC26.18■■□□□ 1.78
HES4Q9HCC6 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC26.18■■□□□ 1.78
HES4Q9HCC6 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
HES4Q9HCC6 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
HES4Q9HCC6 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
HES4Q9HCC6 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC25.96■■□□□ 1.75
HES4Q9HCC6 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC25.92■■□□□ 1.74
HES4Q9HCC6 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
HES4Q9HCC6 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
HES4Q9HCC6 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC25.79■■□□□ 1.72
HES4Q9HCC6 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC25.73■■□□□ 1.71
HES4Q9HCC6 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
HES4Q9HCC6 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
HES4Q9HCC6 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
HES4Q9HCC6 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
HES4Q9HCC6 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC25.55■■□□□ 1.68
HES4Q9HCC6 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
HES4Q9HCC6 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
HES4Q9HCC6 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC25.36■■□□□ 1.65
HES4Q9HCC6 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
HES4Q9HCC6 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
HES4Q9HCC6 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
HES4Q9HCC6 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC25.3■■□□□ 1.64
HES4Q9HCC6 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
HES4Q9HCC6 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC25.25■■□□□ 1.63
HES4Q9HCC6 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC25.22■■□□□ 1.63
HES4Q9HCC6 ILK-212ENST00000532063 1617 ntTSL 2 BASIC25.21■■□□□ 1.63
HES4Q9HCC6 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC25.2■■□□□ 1.62
HES4Q9HCC6 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC25.18■■□□□ 1.62
HES4Q9HCC6 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
HES4Q9HCC6 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC25.15■■□□□ 1.62
HES4Q9HCC6 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC25.12■■□□□ 1.61
HES4Q9HCC6 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC25.11■■□□□ 1.61
HES4Q9HCC6 INO80B-203ENST00000409917 796 ntTSL 2 BASIC25.11■■□□□ 1.61
HES4Q9HCC6 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
HES4Q9HCC6 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC25.1■■□□□ 1.61
HES4Q9HCC6 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
HES4Q9HCC6 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
HES4Q9HCC6 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC24.95■■□□□ 1.59
HES4Q9HCC6 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
HES4Q9HCC6 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC24.93■■□□□ 1.58
HES4Q9HCC6 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
HES4Q9HCC6 AC015813.7-201ENST00000623294 581 ntBASIC24.91■■□□□ 1.58
HES4Q9HCC6 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
HES4Q9HCC6 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC24.88■■□□□ 1.57
HES4Q9HCC6 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
HES4Q9HCC6 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
HES4Q9HCC6 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
HES4Q9HCC6 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC24.74■■□□□ 1.55
HES4Q9HCC6 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
HES4Q9HCC6 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
HES4Q9HCC6 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
HES4Q9HCC6 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC24.67■■□□□ 1.54
HES4Q9HCC6 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
HES4Q9HCC6 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
HES4Q9HCC6 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
HES4Q9HCC6 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC24.59■■□□□ 1.53
HES4Q9HCC6 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
HES4Q9HCC6 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
HES4Q9HCC6 AC145285.7-201ENST00000614819 1539 ntBASIC24.53■■□□□ 1.52
HES4Q9HCC6 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC24.52■■□□□ 1.52
HES4Q9HCC6 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
HES4Q9HCC6 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC24.49■■□□□ 1.51
HES4Q9HCC6 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
HES4Q9HCC6 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
HES4Q9HCC6 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
HES4Q9HCC6 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
HES4Q9HCC6 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
HES4Q9HCC6 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
HES4Q9HCC6 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
HES4Q9HCC6 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC24.41■■□□□ 1.5
HES4Q9HCC6 AC006077.2-201ENST00000623591 457 ntBASIC24.36■■□□□ 1.49
HES4Q9HCC6 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
HES4Q9HCC6 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
HES4Q9HCC6 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms