Protein–RNA interactions for Protein: Q96KF2

PRAC1, Small nuclear protein PRAC1, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAC1Q96KF2 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
PRAC1Q96KF2 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
PRAC1Q96KF2 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
PRAC1Q96KF2 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
PRAC1Q96KF2 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC13.07□□□□□ -0.32
PRAC1Q96KF2 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC13.07□□□□□ -0.32
PRAC1Q96KF2 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC13.07□□□□□ -0.32
PRAC1Q96KF2 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
PRAC1Q96KF2 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
PRAC1Q96KF2 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
PRAC1Q96KF2 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC13.07□□□□□ -0.32
PRAC1Q96KF2 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
PRAC1Q96KF2 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
PRAC1Q96KF2 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
PRAC1Q96KF2 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
PRAC1Q96KF2 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
PRAC1Q96KF2 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
PRAC1Q96KF2 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
PRAC1Q96KF2 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
PRAC1Q96KF2 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC13.06□□□□□ -0.32
PRAC1Q96KF2 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
PRAC1Q96KF2 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
PRAC1Q96KF2 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC13.04□□□□□ -0.32
PRAC1Q96KF2 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
PRAC1Q96KF2 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
PRAC1Q96KF2 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
PRAC1Q96KF2 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
PRAC1Q96KF2 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
PRAC1Q96KF2 CLDN5-201ENST00000403084 2357 ntBASIC13.02□□□□□ -0.32
PRAC1Q96KF2 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
PRAC1Q96KF2 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
PRAC1Q96KF2 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
PRAC1Q96KF2 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
PRAC1Q96KF2 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PRAC1Q96KF2 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
PRAC1Q96KF2 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PRAC1Q96KF2 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PRAC1Q96KF2 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PRAC1Q96KF2 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC13□□□□□ -0.33
PRAC1Q96KF2 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PRAC1Q96KF2 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
PRAC1Q96KF2 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC13□□□□□ -0.33
PRAC1Q96KF2 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
PRAC1Q96KF2 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PRAC1Q96KF2 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
PRAC1Q96KF2 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
PRAC1Q96KF2 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
PRAC1Q96KF2 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
PRAC1Q96KF2 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
PRAC1Q96KF2 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC12.98□□□□□ -0.33
PRAC1Q96KF2 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
PRAC1Q96KF2 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PRAC1Q96KF2 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
PRAC1Q96KF2 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
PRAC1Q96KF2 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
PRAC1Q96KF2 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
PRAC1Q96KF2 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
PRAC1Q96KF2 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
PRAC1Q96KF2 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
PRAC1Q96KF2 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
PRAC1Q96KF2 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
PRAC1Q96KF2 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
PRAC1Q96KF2 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
PRAC1Q96KF2 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
PRAC1Q96KF2 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
PRAC1Q96KF2 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
PRAC1Q96KF2 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
PRAC1Q96KF2 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
PRAC1Q96KF2 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
PRAC1Q96KF2 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
PRAC1Q96KF2 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC12.93□□□□□ -0.34
PRAC1Q96KF2 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC12.93□□□□□ -0.34
PRAC1Q96KF2 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
PRAC1Q96KF2 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
PRAC1Q96KF2 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
PRAC1Q96KF2 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
PRAC1Q96KF2 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PRAC1Q96KF2 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
PRAC1Q96KF2 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC12.91□□□□□ -0.34
PRAC1Q96KF2 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PRAC1Q96KF2 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
PRAC1Q96KF2 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
PRAC1Q96KF2 RNF165-205ENST00000588679 2904 ntBASIC12.9□□□□□ -0.34
PRAC1Q96KF2 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC12.9□□□□□ -0.34
PRAC1Q96KF2 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
PRAC1Q96KF2 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
PRAC1Q96KF2 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
PRAC1Q96KF2 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC12.9□□□□□ -0.35
PRAC1Q96KF2 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
PRAC1Q96KF2 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
PRAC1Q96KF2 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC12.89□□□□□ -0.35
PRAC1Q96KF2 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
PRAC1Q96KF2 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
PRAC1Q96KF2 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
PRAC1Q96KF2 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC12.88□□□□□ -0.35
PRAC1Q96KF2 AC133561.1-201ENST00000568600 2415 ntBASIC12.88□□□□□ -0.35
PRAC1Q96KF2 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
PRAC1Q96KF2 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
PRAC1Q96KF2 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
PRAC1Q96KF2 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms