RNA–Protein interactions for RNA: ENST00000342183.9

NRXN1-202, Transcript of neurexin 1, humanhuman

TSL 1 (best) BASIC

Gene NRXN1, Length 3,315 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN1-202ENST00000342183 NISCHQ9Y2I1 1504 aa34.66■■■■□ 3.14
NRXN1-202ENST00000342183 HRCP23327 699 aa34.24■■■■□ 3.07
NRXN1-202ENST00000342183 PPARGC1BQ86YN6 1023 aaKnown RBP34.09■■■■□ 3.05
NRXN1-202ENST00000342183 PELP1Q8IZL8 1130 aaKnown RBP33.87■■■■□ 3.01
NRXN1-202ENST00000342183 PCGF6Q9BYE7 350 aa33.55■■■□□ 2.96
NRXN1-202ENST00000342183 SCAF1Q9H7N4 1312 aaKnown RBP33.09■■■□□ 2.89
NRXN1-202ENST00000342183 SUPT5HO00267 1087 aaKnown RBP32.76■■■□□ 2.84
NRXN1-202ENST00000342183 MYT1Q01538 1121 aa32.61■■■□□ 2.81
NRXN1-202ENST00000342183 SHROOM4Q9ULL8 1493 aa32.55■■■□□ 2.8
NRXN1-202ENST00000342183 MYO15BQ96JP2 1530 aa32.5■■■□□ 2.79
NRXN1-202ENST00000342183 CHIC1Q5VXU3 224 aa32.06■■■□□ 2.72
NRXN1-202ENST00000342183 NEUROD1Q13562 356 aa31.93■■■□□ 2.7
NRXN1-202ENST00000342183 GTF3C3Q9Y5Q9 886 aa31.87■■■□□ 2.69
NRXN1-202ENST00000342183 LOC105371045A0A1W2PR82 267 aa31.85■■■□□ 2.69
NRXN1-202ENST00000342183 ACIN1Q9UKV3 1341 aaKnown RBP31.84■■■□□ 2.69
NRXN1-202ENST00000342183 TRIM26Q12899 539 aaPredicted RBP31.77■■■□□ 2.68
NRXN1-202ENST00000342183 ZEB1P37275 1124 aaPredicted RBP31.54■■■□□ 2.64
NRXN1-202ENST00000342183 DCAF1Q9Y4B6 1507 aa31.48■■■□□ 2.63
NRXN1-202ENST00000342183 CENPBP07199 599 aaPredicted RBP31.24■■■□□ 2.59
NRXN1-202ENST00000342183 CCDC180Q9P1Z9 1646 aa31.18■■■□□ 2.58
NRXN1-202ENST00000342183 BCL11AQ9H165 835 aa31.14■■■□□ 2.58
NRXN1-202ENST00000342183 YTHDC1Q96MU7 727 aaKnown RBP31.03■■■□□ 2.56
NRXN1-202ENST00000342183 FAM9AQ8IZU1 332 aaPredicted RBP31■■■□□ 2.55
NRXN1-202ENST00000342183 DIEXFQ68CQ4 756 aaKnown RBP30.95■■■□□ 2.54
NRXN1-202ENST00000342183 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.82■■■□□ 2.52
NRXN1-202ENST00000342183 EHMT2Q96KQ7 1210 aa30.81■■■□□ 2.52
NRXN1-202ENST00000342183 TTBK1Q5TCY1 1321 aaPredicted RBP30.66■■■□□ 2.5
NRXN1-202ENST00000342183 CCER1Q8TC90 406 aaPredicted RBP30.64■■■□□ 2.5
NRXN1-202ENST00000342183 PRKCSHP14314 528 aaPredicted RBP30.5■■■□□ 2.47
NRXN1-202ENST00000342183 ANP32EQ9BTT0 268 aa30.44■■■□□ 2.46
NRXN1-202ENST00000342183 CSRNP3Q8WYN3 585 aa30.41■■■□□ 2.46
NRXN1-202ENST00000342183 MIER1Q8N108 512 aa30.17■■■□□ 2.42
NRXN1-202ENST00000342183 DCAF8L2P0C7V8 631 aa30.12■■■□□ 2.41
NRXN1-202ENST00000342183 TRIM41Q8WV44 630 aa30.11■■■□□ 2.41
NRXN1-202ENST00000342183 TSHZ2Q9NRE2 1034 aa30.07■■■□□ 2.4
NRXN1-202ENST00000342183 ZNF316A6NFI3 1004 aaPredicted RBP29.99■■■□□ 2.39
NRXN1-202ENST00000342183 SUPT16HQ9Y5B9 1047 aaKnown RBP29.95■■■□□ 2.39
NRXN1-202ENST00000342183 BCANQ96GW7 911 aa29.71■■■□□ 2.35
NRXN1-202ENST00000342183 ZCCHC6Q5VYS8 1495 aaKnown RBP29.54■■■□□ 2.32
NRXN1-202ENST00000342183 ANO8Q9HCE9 1232 aaPredicted RBP29.34■■■□□ 2.29
NRXN1-202ENST00000342183 ERICH6Q7L0X2 663 aa29.32■■■□□ 2.28
NRXN1-202ENST00000342183 RBM19Q9Y4C8 960 aaKnown RBP29.3■■■□□ 2.28
NRXN1-202ENST00000342183 MSH5O43196 834 aa29.19■■■□□ 2.26
NRXN1-202ENST00000342183 ITGAEP38570 1179 aa29.19■■■□□ 2.26
NRXN1-202ENST00000342183 FKBP8Q14318 412 aa29.16■■■□□ 2.26
NRXN1-202ENST00000342183 CLSPNQ9HAW4 1339 aa29.15■■■□□ 2.26
NRXN1-202ENST00000342183 HNRNPUL2Q1KMD3 747 aaKnown RBP29.12■■■□□ 2.25
NRXN1-202ENST00000342183 KCNH8Q96L42 1107 aa29.05■■■□□ 2.24
NRXN1-202ENST00000342183 CCDC136Q96JN2 1154 aa29■■■□□ 2.23
NRXN1-202ENST00000342183 APLP2Q06481 763 aa28.98■■■□□ 2.23
NRXN1-202ENST00000342183 SALL2Q9Y467 1007 aaPredicted RBP28.92■■■□□ 2.22
NRXN1-202ENST00000342183 DEKP35659 375 aaKnown RBP28.9■■■□□ 2.22
NRXN1-202ENST00000342183 NEFLP07196 543 aa28.68■■■□□ 2.18
NRXN1-202ENST00000342183 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.68■■■□□ 2.18
NRXN1-202ENST00000342183 RTN4Q9NQC3 1192 aaKnown RBP28.66■■■□□ 2.18
NRXN1-202ENST00000342183 NBR1Q14596 966 aa28.64■■■□□ 2.18
NRXN1-202ENST00000342183 RB1CC1Q8TDY2 1594 aa28.55■■■□□ 2.16
NRXN1-202ENST00000342183 TRIM52Q96A61 297 aa28.55■■■□□ 2.16
NRXN1-202ENST00000342183 IRX6P78412 446 aaPredicted RBP28.52■■■□□ 2.16
NRXN1-202ENST00000342183 RSF1Q96T23 1441 aaPredicted RBP28.47■■■□□ 2.15
NRXN1-202ENST00000342183 IL27Q8NEV9 243 aa28.45■■■□□ 2.14
NRXN1-202ENST00000342183 CEP162Q5TB80 1403 aa28.43■■■□□ 2.14
NRXN1-202ENST00000342183 FANCIQ9NVI1 1328 aa28.42■■■□□ 2.14
NRXN1-202ENST00000342183 UBTFP17480 764 aaKnown RBP28.39■■■□□ 2.14
NRXN1-202ENST00000342183 CDK11AQ9UQ88 783 aaPredicted RBP28.35■■■□□ 2.13
NRXN1-202ENST00000342183 WRNQ14191 1432 aaPredicted RBP eCLIP28.35■■■□□ 2.13
NRXN1-202ENST00000342183 DDX10Q13206 875 aaKnown RBP28.26■■■□□ 2.12
NRXN1-202ENST00000342183 MYT1LQ9UL68 1186 aa28.25■■■□□ 2.11
NRXN1-202ENST00000342183 UBE2Q2Q8WVN8 375 aa28.23■■■□□ 2.11
NRXN1-202ENST00000342183 PAK3O75914 559 aaPredicted RBP28.22■■■□□ 2.11
NRXN1-202ENST00000342183 ABCC9O60706 1549 aa28.18■■■□□ 2.1
NRXN1-202ENST00000342183 RANGAP1P46060 587 aaPredicted RBP28.18■■■□□ 2.1
NRXN1-202ENST00000342183 EIF5BO60841 1220 aaKnown RBP28.13■■■□□ 2.09
NRXN1-202ENST00000342183 HIRIP3Q9BW71 556 aaPredicted RBP28.11■■■□□ 2.09
NRXN1-202ENST00000342183 ERICH6BQ5W0A0 696 aa28.09■■■□□ 2.09
NRXN1-202ENST00000342183 NOP58Q9Y2X3 529 aaKnown RBP28.08■■■□□ 2.09
NRXN1-202ENST00000342183 DHX57Q6P158 1386 aaKnown RBP28.03■■■□□ 2.08
NRXN1-202ENST00000342183 RTL5Q5HYW3 569 aaPredicted RBP28■■■□□ 2.07
NRXN1-202ENST00000342183 TNIKQ9UKE5 1360 aa27.94■■■□□ 2.06
NRXN1-202ENST00000342183 B4GALNT3Q6L9W6 998 aa27.92■■■□□ 2.06
NRXN1-202ENST00000342183 SOGA1O94964 1423 aa27.92■■■□□ 2.06
NRXN1-202ENST00000342183 ABCC8Q09428 1581 aa27.88■■■□□ 2.05
NRXN1-202ENST00000342183 CCDC88BA6NC98 1476 aa27.85■■■□□ 2.05
NRXN1-202ENST00000342183 HNRNPUQ00839 825 aaKnown RBP eCLIP27.83■■■□□ 2.05
NRXN1-202ENST00000342183 ANP32CO43423 234 aa27.77■■■□□ 2.04
NRXN1-202ENST00000342183 RUSC2Q8N2Y8 1516 aa27.76■■■□□ 2.04
NRXN1-202ENST00000342183 PKNOX2Q96KN3 472 aa27.74■■■□□ 2.03
NRXN1-202ENST00000342183 TIMELESSQ9UNS1 1208 aa27.73■■■□□ 2.03
NRXN1-202ENST00000342183 BRPF3Q9ULD4 1205 aa27.68■■■□□ 2.02
NRXN1-202ENST00000342183 LAS1LQ9Y4W2 734 aaKnown RBP27.67■■■□□ 2.02
NRXN1-202ENST00000342183 PPP4R2Q9NY27 417 aa27.67■■■□□ 2.02
NRXN1-202ENST00000342183 PPP1R15AO75807 674 aaPredicted RBP27.66■■■□□ 2.02
NRXN1-202ENST00000342183 ZBTB47Q9UFB7 747 aaPredicted RBP27.66■■■□□ 2.02
NRXN1-202ENST00000342183 SCRIBQ14160 1630 aa27.64■■■□□ 2.02
NRXN1-202ENST00000342183 SIN3AQ96ST3 1273 aa27.6■■■□□ 2.01
NRXN1-202ENST00000342183 ANP32AP39687 249 aaKnown RBP27.59■■■□□ 2.01
NRXN1-202ENST00000342183 NPM2Q86SE8 214 aaKnown RBP27.59■■■□□ 2.01
NRXN1-202ENST00000342183 CCER2I3L3R5 266 aa27.57■■■□□ 2
NRXN1-202ENST00000342183 IPO9Q96P70 1041 aaKnown RBP27.57■■■□□ 2
NRXN1-202ENST00000342183 CECR2Q9BXF3 1484 aa27.56■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms