RNA–Protein interactions for RNA: ENST00000450554.6

U2AF2-202, Transcript of U2 small nuclear RNA auxiliary factor 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene U2AF2, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF2-202ENST00000450554 NISCHQ9Y2I1 1504 aa41.44■■■■■ 4.23
U2AF2-202ENST00000450554 SHROOM4Q9ULL8 1493 aa36.81■■■■□ 3.48
U2AF2-202ENST00000450554 SUPT5HO00267 1087 aaKnown RBP36.6■■■■□ 3.45
U2AF2-202ENST00000450554 HRCP23327 699 aa36.58■■■■□ 3.45
U2AF2-202ENST00000450554 PCGF6Q9BYE7 350 aa36.06■■■■□ 3.36
U2AF2-202ENST00000450554 MYO15BQ96JP2 1530 aa35.99■■■■□ 3.35
U2AF2-202ENST00000450554 PPARGC1BQ86YN6 1023 aaKnown RBP35.97■■■■□ 3.35
U2AF2-202ENST00000450554 CHIC1Q5VXU3 224 aa35.81■■■■□ 3.32
U2AF2-202ENST00000450554 ZCCHC6Q5VYS8 1495 aaKnown RBP35.22■■■■□ 3.23
U2AF2-202ENST00000450554 DCAF1Q9Y4B6 1507 aa35.07■■■■□ 3.2
U2AF2-202ENST00000450554 LOC105371045A0A1W2PR82 267 aa35.06■■■■□ 3.2
U2AF2-202ENST00000450554 DCAF8L2P0C7V8 631 aa34.86■■■■□ 3.17
U2AF2-202ENST00000450554 PELP1Q8IZL8 1130 aaKnown RBP34.86■■■■□ 3.17
U2AF2-202ENST00000450554 TRIM26Q12899 539 aaPredicted RBP34.85■■■■□ 3.17
U2AF2-202ENST00000450554 CCDC180Q9P1Z9 1646 aa34.59■■■■□ 3.13
U2AF2-202ENST00000450554 SCAF1Q9H7N4 1312 aaKnown RBP34.52■■■■□ 3.12
U2AF2-202ENST00000450554 ZEB1P37275 1124 aaPredicted RBP34.44■■■■□ 3.1
U2AF2-202ENST00000450554 FAM9AQ8IZU1 332 aaPredicted RBP33.89■■■■□ 3.02
U2AF2-202ENST00000450554 EHMT2Q96KQ7 1210 aa33.83■■■■□ 3.01
U2AF2-202ENST00000450554 TRIM41Q8WV44 630 aa33.8■■■■□ 3
U2AF2-202ENST00000450554 ACIN1Q9UKV3 1341 aaKnown RBP33.72■■■□□ 2.99
U2AF2-202ENST00000450554 NEUROD1Q13562 356 aa33.69■■■□□ 2.98
U2AF2-202ENST00000450554 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.51■■■□□ 2.95
U2AF2-202ENST00000450554 GTF3C3Q9Y5Q9 886 aa33.5■■■□□ 2.95
U2AF2-202ENST00000450554 ABCC9O60706 1549 aa33.43■■■□□ 2.94
U2AF2-202ENST00000450554 CCER1Q8TC90 406 aaPredicted RBP33.42■■■□□ 2.94
U2AF2-202ENST00000450554 MYT1Q01538 1121 aa33.38■■■□□ 2.93
U2AF2-202ENST00000450554 RSF1Q96T23 1441 aaPredicted RBP33.35■■■□□ 2.93
U2AF2-202ENST00000450554 CENPBP07199 599 aaPredicted RBP33.34■■■□□ 2.93
U2AF2-202ENST00000450554 DIEXFQ68CQ4 756 aaKnown RBP33.31■■■□□ 2.92
U2AF2-202ENST00000450554 RB1CC1Q8TDY2 1594 aa33.22■■■□□ 2.91
U2AF2-202ENST00000450554 TTBK1Q5TCY1 1321 aaPredicted RBP32.99■■■□□ 2.87
U2AF2-202ENST00000450554 SCRIBQ14160 1630 aa32.97■■■□□ 2.87
U2AF2-202ENST00000450554 YTHDC1Q96MU7 727 aaKnown RBP32.88■■■□□ 2.85
U2AF2-202ENST00000450554 ZNF316A6NFI3 1004 aaPredicted RBP32.69■■■□□ 2.82
U2AF2-202ENST00000450554 CECR2Q9BXF3 1484 aa32.52■■■□□ 2.8
U2AF2-202ENST00000450554 MIER1Q8N108 512 aa32.49■■■□□ 2.79
U2AF2-202ENST00000450554 MROH2BQ7Z745 1585 aa32.43■■■□□ 2.78
U2AF2-202ENST00000450554 WRNQ14191 1432 aaPredicted RBP eCLIP32.38■■■□□ 2.772e-9■□□□□ 8.8
U2AF2-202ENST00000450554 CEP162Q5TB80 1403 aa32.35■■■□□ 2.77
U2AF2-202ENST00000450554 WIZO95785 1651 aa32.31■■■□□ 2.76
U2AF2-202ENST00000450554 HNRNPUL2Q1KMD3 747 aaKnown RBP32.17■■■□□ 2.74
U2AF2-202ENST00000450554 CCDC88BA6NC98 1476 aa32.15■■■□□ 2.74
U2AF2-202ENST00000450554 UBTFP17480 764 aaKnown RBP32.14■■■□□ 2.74
U2AF2-202ENST00000450554 ABCC8Q09428 1581 aa32.12■■■□□ 2.73
U2AF2-202ENST00000450554 EIF4G1Q04637 1599 aaKnown RBP32.1■■■□□ 2.73
U2AF2-202ENST00000450554 TNIKQ9UKE5 1360 aa32.09■■■□□ 2.73
U2AF2-202ENST00000450554 SOGA1O94964 1423 aa32.06■■■□□ 2.72
U2AF2-202ENST00000450554 BAZ1AQ9NRL2 1556 aaPredicted RBP32■■■□□ 2.71
U2AF2-202ENST00000450554 CSRNP3Q8WYN3 585 aa31.94■■■□□ 2.7
U2AF2-202ENST00000450554 SUPT16HQ9Y5B9 1047 aaKnown RBP31.9■■■□□ 2.7
U2AF2-202ENST00000450554 RUSC2Q8N2Y8 1516 aa31.87■■■□□ 2.69
U2AF2-202ENST00000450554 GOLGA3Q08378 1498 aa31.73■■■□□ 2.67
U2AF2-202ENST00000450554 EEA1Q15075 1411 aa31.7■■■□□ 2.67
U2AF2-202ENST00000450554 NACADO15069 1562 aa31.7■■■□□ 2.66
U2AF2-202ENST00000450554 CLSPNQ9HAW4 1339 aa31.7■■■□□ 2.66
U2AF2-202ENST00000450554 TSHZ2Q9NRE2 1034 aa31.7■■■□□ 2.66
U2AF2-202ENST00000450554 ANP32EQ9BTT0 268 aa31.64■■■□□ 2.66
U2AF2-202ENST00000450554 TOP2AP11388 1531 aaKnown RBP31.63■■■□□ 2.65
U2AF2-202ENST00000450554 APLP2Q06481 763 aa31.6■■■□□ 2.65
U2AF2-202ENST00000450554 SMARCA2P51531 1590 aa31.56■■■□□ 2.64
U2AF2-202ENST00000450554 RANGAP1P46060 587 aaPredicted RBP31.55■■■□□ 2.64
U2AF2-202ENST00000450554 CLIP1P30622 1438 aa31.52■■■□□ 2.64
U2AF2-202ENST00000450554 BCL11AQ9H165 835 aa31.44■■■□□ 2.62
U2AF2-202ENST00000450554 VPS8Q8N3P4 1428 aa31.43■■■□□ 2.62
U2AF2-202ENST00000450554 BCANQ96GW7 911 aa31.4■■■□□ 2.62
U2AF2-202ENST00000450554 CEP164Q9UPV0 1460 aa31.39■■■□□ 2.62
U2AF2-202ENST00000450554 DHX57Q6P158 1386 aaKnown RBP31.38■■■□□ 2.61
U2AF2-202ENST00000450554 SMARCA4P51532 1647 aa31.32■■■□□ 2.61
U2AF2-202ENST00000450554 KCNH8Q96L42 1107 aa31.31■■■□□ 2.6
U2AF2-202ENST00000450554 KIF21BO75037 1637 aa31.22■■■□□ 2.59
U2AF2-202ENST00000450554 FKBP8Q14318 412 aa31.17■■■□□ 2.58
U2AF2-202ENST00000450554 RAPGEF2Q9Y4G8 1499 aa31.17■■■□□ 2.58
U2AF2-202ENST00000450554 SYNJ1O43426 1573 aa31.1■■■□□ 2.57
U2AF2-202ENST00000450554 BAZ1BQ9UIG0 1483 aaKnown RBP31.06■■■□□ 2.56
U2AF2-202ENST00000450554 KANK4Q5T7N3 995 aaPredicted RBP31.04■■■□□ 2.56
U2AF2-202ENST00000450554 ITGAEP38570 1179 aa31■■■□□ 2.55
U2AF2-202ENST00000450554 RBM19Q9Y4C8 960 aaKnown RBP30.98■■■□□ 2.55
U2AF2-202ENST00000450554 NEFLP07196 543 aa30.91■■■□□ 2.54
U2AF2-202ENST00000450554 DDX10Q13206 875 aaKnown RBP30.91■■■□□ 2.54
U2AF2-202ENST00000450554 TRIM52Q96A61 297 aa30.8■■■□□ 2.52
U2AF2-202ENST00000450554 ARAP1Q96P48 1450 aa30.8■■■□□ 2.52
U2AF2-202ENST00000450554 RRBP1Q9P2E9 1410 aaKnown RBP30.79■■■□□ 2.52
U2AF2-202ENST00000450554 CCNB3Q8WWL7 1395 aa30.75■■■□□ 2.51
U2AF2-202ENST00000450554 PABPN1Q86U42 306 aaKnown RBP eCLIP30.7■■■□□ 2.513e-8■■□□□ 12.2
U2AF2-202ENST00000450554 CUX2O14529 1486 aa30.69■■■□□ 2.5
U2AF2-202ENST00000450554 RAB3GAP2Q9H2M9 1393 aa30.69■■■□□ 2.5
U2AF2-202ENST00000450554 HIRIP3Q9BW71 556 aaPredicted RBP30.68■■■□□ 2.5
U2AF2-202ENST00000450554 MSH5O43196 834 aa30.68■■■□□ 2.5
U2AF2-202ENST00000450554 SIN3AQ96ST3 1273 aa30.64■■■□□ 2.5
U2AF2-202ENST00000450554 MAPKBP1O60336 1514 aa30.63■■■□□ 2.49
U2AF2-202ENST00000450554 UNC13AQ9UPW8 1703 aa30.62■■■□□ 2.49
U2AF2-202ENST00000450554 PPP1R15AO75807 674 aaPredicted RBP30.59■■■□□ 2.49
U2AF2-202ENST00000450554 WDR97A6NE52 1622 aa30.58■■■□□ 2.49
U2AF2-202ENST00000450554 ANP32CO43423 234 aa30.55■■■□□ 2.48
U2AF2-202ENST00000450554 PRXQ9BXM0 1461 aa30.54■■■□□ 2.48
U2AF2-202ENST00000450554 ERICH3Q5RHP9 1530 aa30.52■■■□□ 2.48
U2AF2-202ENST00000450554 ERICH6Q7L0X2 663 aa30.5■■■□□ 2.47
U2AF2-202ENST00000450554 CCER2I3L3R5 266 aa30.48■■■□□ 2.47
U2AF2-202ENST00000450554 TOP2BQ02880 1626 aa30.47■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms