RNA–Protein interactions for RNA: ENST00000342854.9

TCF7-201, Transcript of transcription factor 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TCF7, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF7-201ENST00000342854 NISCHQ9Y2I1 1504 aa39.68■■■■□ 3.94
TCF7-201ENST00000342854 SHROOM4Q9ULL8 1493 aa34.2■■■■□ 3.07
TCF7-201ENST00000342854 PELP1Q8IZL8 1130 aaKnown RBP34.14■■■■□ 3.06
TCF7-201ENST00000342854 SUPT5HO00267 1087 aaKnown RBP33.78■■■■□ 3
TCF7-201ENST00000342854 ZCCHC6Q5VYS8 1495 aaKnown RBP33.7■■■□□ 2.99
TCF7-201ENST00000342854 CCDC180Q9P1Z9 1646 aa33.53■■■□□ 2.96
TCF7-201ENST00000342854 MYO15BQ96JP2 1530 aa33.29■■■□□ 2.92
TCF7-201ENST00000342854 MYT1Q01538 1121 aa33.24■■■□□ 2.91
TCF7-201ENST00000342854 HRCP23327 699 aa33.18■■■□□ 2.9
TCF7-201ENST00000342854 CHIC1Q5VXU3 224 aa33.18■■■□□ 2.9
TCF7-201ENST00000342854 PCGF6Q9BYE7 350 aa32.72■■■□□ 2.83
TCF7-201ENST00000342854 DCAF8L2P0C7V8 631 aa32.59■■■□□ 2.81
TCF7-201ENST00000342854 DCAF1Q9Y4B6 1507 aa32.56■■■□□ 2.8
TCF7-201ENST00000342854 PPARGC1BQ86YN6 1023 aaKnown RBP32.49■■■□□ 2.79
TCF7-201ENST00000342854 SCAF1Q9H7N4 1312 aaKnown RBP32.21■■■□□ 2.75
TCF7-201ENST00000342854 LOC105371045A0A1W2PR82 267 aa32.2■■■□□ 2.74
TCF7-201ENST00000342854 TRIM26Q12899 539 aaPredicted RBP31.98■■■□□ 2.71
TCF7-201ENST00000342854 ABCC9O60706 1549 aa31.95■■■□□ 2.71
TCF7-201ENST00000342854 RSF1Q96T23 1441 aaPredicted RBP31.61■■■□□ 2.65
TCF7-201ENST00000342854 TTBK1Q5TCY1 1321 aaPredicted RBP31.59■■■□□ 2.65
TCF7-201ENST00000342854 ZEB1P37275 1124 aaPredicted RBP31.54■■■□□ 2.64
TCF7-201ENST00000342854 SCRIBQ14160 1630 aa31.5■■■□□ 2.63
TCF7-201ENST00000342854 RB1CC1Q8TDY2 1594 aa31.44■■■□□ 2.62
TCF7-201ENST00000342854 TRIM41Q8WV44 630 aa31.41■■■□□ 2.62
TCF7-201ENST00000342854 FAM9AQ8IZU1 332 aaPredicted RBP31.19■■■□□ 2.58
TCF7-201ENST00000342854 BCL11AQ9H165 835 aa31.07■■■□□ 2.56
TCF7-201ENST00000342854 PRKCSHP14314 528 aaPredicted RBP31.05■■■□□ 2.56
TCF7-201ENST00000342854 CECR2Q9BXF3 1484 aa30.91■■■□□ 2.54
TCF7-201ENST00000342854 ACIN1Q9UKV3 1341 aaKnown RBP30.91■■■□□ 2.54
TCF7-201ENST00000342854 EHMT2Q96KQ7 1210 aa30.9■■■□□ 2.54
TCF7-201ENST00000342854 MROH2BQ7Z745 1585 aa30.89■■■□□ 2.54
TCF7-201ENST00000342854 GTF3C3Q9Y5Q9 886 aa30.82■■■□□ 2.52
TCF7-201ENST00000342854 WIZO95785 1651 aa30.8■■■□□ 2.52
TCF7-201ENST00000342854 NEUROD1Q13562 356 aa30.8■■■□□ 2.52
TCF7-201ENST00000342854 NACADO15069 1562 aa30.79■■■□□ 2.52
TCF7-201ENST00000342854 EIF4G1Q04637 1599 aaKnown RBP30.69■■■□□ 2.5
TCF7-201ENST00000342854 BAZ1AQ9NRL2 1556 aaPredicted RBP30.66■■■□□ 2.5
TCF7-201ENST00000342854 CENPBP07199 599 aaPredicted RBP30.63■■■□□ 2.49
TCF7-201ENST00000342854 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.57■■■□□ 2.48
TCF7-201ENST00000342854 CCER1Q8TC90 406 aaPredicted RBP30.52■■■□□ 2.48
TCF7-201ENST00000342854 WRNQ14191 1432 aaPredicted RBP eCLIP30.39■■■□□ 2.46
TCF7-201ENST00000342854 ABCC8Q09428 1581 aa30.3■■■□□ 2.44
TCF7-201ENST00000342854 TOP2AP11388 1531 aaKnown RBP30.29■■■□□ 2.44
TCF7-201ENST00000342854 DIEXFQ68CQ4 756 aaKnown RBP30.27■■■□□ 2.44
TCF7-201ENST00000342854 CCDC88BA6NC98 1476 aa30.26■■■□□ 2.43
TCF7-201ENST00000342854 CEP162Q5TB80 1403 aa30.24■■■□□ 2.43
TCF7-201ENST00000342854 ERICH6Q7L0X2 663 aa30.2■■■□□ 2.42
TCF7-201ENST00000342854 SMARCA2P51531 1590 aa30.16■■■□□ 2.42
TCF7-201ENST00000342854 SMARCA4P51532 1647 aa30.14■■■□□ 2.42
TCF7-201ENST00000342854 TNIKQ9UKE5 1360 aa30.13■■■□□ 2.41
TCF7-201ENST00000342854 SOGA1O94964 1423 aa30.08■■■□□ 2.41
TCF7-201ENST00000342854 EEA1Q15075 1411 aa30.03■■■□□ 2.4
TCF7-201ENST00000342854 ANP32EQ9BTT0 268 aa30.01■■■□□ 2.39
TCF7-201ENST00000342854 APLP2Q06481 763 aa29.93■■■□□ 2.38
TCF7-201ENST00000342854 RUSC2Q8N2Y8 1516 aa29.93■■■□□ 2.38
TCF7-201ENST00000342854 CSRNP3Q8WYN3 585 aa29.92■■■□□ 2.38
TCF7-201ENST00000342854 UNC13AQ9UPW8 1703 aa29.9■■■□□ 2.38
TCF7-201ENST00000342854 ZNF316A6NFI3 1004 aaPredicted RBP29.9■■■□□ 2.38
TCF7-201ENST00000342854 GOLGA3Q08378 1498 aa29.87■■■□□ 2.37
TCF7-201ENST00000342854 UBTFP17480 764 aaKnown RBP29.83■■■□□ 2.37
TCF7-201ENST00000342854 KIF21BO75037 1637 aa29.67■■■□□ 2.34
TCF7-201ENST00000342854 CEP164Q9UPV0 1460 aa29.64■■■□□ 2.33
TCF7-201ENST00000342854 SYNJ1O43426 1573 aa29.57■■■□□ 2.32
TCF7-201ENST00000342854 YTHDC1Q96MU7 727 aaKnown RBP29.57■■■□□ 2.32
TCF7-201ENST00000342854 MIER1Q8N108 512 aa29.55■■■□□ 2.32
TCF7-201ENST00000342854 HNRNPUL2Q1KMD3 747 aaKnown RBP29.54■■■□□ 2.32
TCF7-201ENST00000342854 CLIP1P30622 1438 aa29.54■■■□□ 2.32
TCF7-201ENST00000342854 PEG3Q9GZU2 1588 aa29.52■■■□□ 2.32
TCF7-201ENST00000342854 VPS8Q8N3P4 1428 aa29.51■■■□□ 2.31
TCF7-201ENST00000342854 BAZ1BQ9UIG0 1483 aaKnown RBP29.45■■■□□ 2.31
TCF7-201ENST00000342854 BICRAQ9NZM4 1560 aa29.39■■■□□ 2.3
TCF7-201ENST00000342854 RAPGEF2Q9Y4G8 1499 aa29.34■■■□□ 2.29
TCF7-201ENST00000342854 PABPN1Q86U42 306 aaKnown RBP eCLIP29.21■■■□□ 2.27
TCF7-201ENST00000342854 TSHZ2Q9NRE2 1034 aa29.2■■■□□ 2.26
TCF7-201ENST00000342854 CLSPNQ9HAW4 1339 aa29.17■■■□□ 2.26
TCF7-201ENST00000342854 ATAD2BQ9ULI0 1458 aa29.16■■■□□ 2.26
TCF7-201ENST00000342854 TOP2BQ02880 1626 aa29.15■■■□□ 2.26
TCF7-201ENST00000342854 DHX57Q6P158 1386 aaKnown RBP29.12■■■□□ 2.25
TCF7-201ENST00000342854 RANGAP1P46060 587 aaPredicted RBP29.07■■■□□ 2.24
TCF7-201ENST00000342854 BIVM-ERCC5R4GMW8 1640 aa29.07■■■□□ 2.24
TCF7-201ENST00000342854 ERICH3Q5RHP9 1530 aa29.07■■■□□ 2.24
TCF7-201ENST00000342854 ANO8Q9HCE9 1232 aaPredicted RBP29.04■■■□□ 2.24
TCF7-201ENST00000342854 ARAP1Q96P48 1450 aa29.04■■■□□ 2.24
TCF7-201ENST00000342854 PRXQ9BXM0 1461 aa28.98■■■□□ 2.23
TCF7-201ENST00000342854 RRBP1Q9P2E9 1410 aaKnown RBP28.92■■■□□ 2.22
TCF7-201ENST00000342854 KANK4Q5T7N3 995 aaPredicted RBP28.9■■■□□ 2.22
TCF7-201ENST00000342854 SUPT16HQ9Y5B9 1047 aaKnown RBP28.9■■■□□ 2.22
TCF7-201ENST00000342854 CUX2O14529 1486 aa28.88■■■□□ 2.21
TCF7-201ENST00000342854 CCNB3Q8WWL7 1395 aa28.72■■■□□ 2.19
TCF7-201ENST00000342854 CUX1P39880 1505 aa28.72■■■□□ 2.19
TCF7-201ENST00000342854 KIF27Q86VH2 1401 aa28.68■■■□□ 2.18
TCF7-201ENST00000342854 ARHGAP35Q9NRY4 1499 aa28.67■■■□□ 2.18
TCF7-201ENST00000342854 MAPKBP1O60336 1514 aa28.6■■■□□ 2.17
TCF7-201ENST00000342854 HMGXB3Q12766 1538 aa28.56■■■□□ 2.16
TCF7-201ENST00000342854 RAB3GAP2Q9H2M9 1393 aa28.55■■■□□ 2.16
TCF7-201ENST00000342854 SALL2Q9Y467 1007 aaPredicted RBP28.51■■■□□ 2.16
TCF7-201ENST00000342854 ITGAEP38570 1179 aa28.51■■■□□ 2.15
TCF7-201ENST00000342854 UBE2Q2Q8WVN8 375 aa28.51■■■□□ 2.15
TCF7-201ENST00000342854 TIAM1Q13009 1591 aa28.5■■■□□ 2.15
TCF7-201ENST00000342854 MAP3K1Q13233 1512 aa28.49■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms