RNA–Protein interactions for RNA: ENST00000377126.3

KLF9-201, Transcript of Kruppel like factor 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KLF9, Length 5,175 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLF9-201ENST00000377126 NISCHQ9Y2I1 1504 aa38.06■■■■□ 3.68
KLF9-201ENST00000377126 DCAF8L2P0C7V8 631 aa36.88■■■■□ 3.49
KLF9-201ENST00000377126 SUPT5HO00267 1087 aaKnown RBP35.78■■■■□ 3.32
KLF9-201ENST00000377126 SHROOM4Q9ULL8 1493 aa35.51■■■■□ 3.28
KLF9-201ENST00000377126 EHMT2Q96KQ7 1210 aa33.96■■■■□ 3.03
KLF9-201ENST00000377126 PCGF6Q9BYE7 350 aa33.54■■■□□ 2.96
KLF9-201ENST00000377126 FAM9AQ8IZU1 332 aaPredicted RBP33.52■■■□□ 2.96
KLF9-201ENST00000377126 TRIM41Q8WV44 630 aa33.23■■■□□ 2.91
KLF9-201ENST00000377126 APLP2Q06481 763 aa33.11■■■□□ 2.89
KLF9-201ENST00000377126 TTBK1Q5TCY1 1321 aaPredicted RBP32.86■■■□□ 2.85
KLF9-201ENST00000377126 ZEB1P37275 1124 aaPredicted RBP32.83■■■□□ 2.85
KLF9-201ENST00000377126 CHIC1Q5VXU3 224 aa32.72■■■□□ 2.83
KLF9-201ENST00000377126 PELP1Q8IZL8 1130 aaKnown RBP32.69■■■□□ 2.82
KLF9-201ENST00000377126 CCER1Q8TC90 406 aaPredicted RBP32.53■■■□□ 2.8
KLF9-201ENST00000377126 UBTFP17480 764 aaKnown RBP32.46■■■□□ 2.79
KLF9-201ENST00000377126 RANGAP1P46060 587 aaPredicted RBP32.43■■■□□ 2.78
KLF9-201ENST00000377126 TRIM26Q12899 539 aaPredicted RBP32.42■■■□□ 2.78
KLF9-201ENST00000377126 HRCP23327 699 aa32.37■■■□□ 2.77
KLF9-201ENST00000377126 LOC105371045A0A1W2PR82 267 aa32.36■■■□□ 2.77
KLF9-201ENST00000377126 MYT1Q01538 1121 aa32.2■■■□□ 2.75
KLF9-201ENST00000377126 CENPBP07199 599 aaPredicted RBP32.19■■■□□ 2.74
KLF9-201ENST00000377126 PPARGC1BQ86YN6 1023 aaKnown RBP32.18■■■□□ 2.74
KLF9-201ENST00000377126 ATP1B4Q9UN42 357 aaPredicted RBP31.89■■■□□ 2.7
KLF9-201ENST00000377126 ABCC9O60706 1549 aa31.75■■■□□ 2.67
KLF9-201ENST00000377126 ZCCHC6Q5VYS8 1495 aaKnown RBP31.73■■■□□ 2.67
KLF9-201ENST00000377126 YTHDC1Q96MU7 727 aaKnown RBP31.55■■■□□ 2.64
KLF9-201ENST00000377126 CCDC180Q9P1Z9 1646 aa31.41■■■□□ 2.62
KLF9-201ENST00000377126 HNRNPUL2Q1KMD3 747 aaKnown RBP31.38■■■□□ 2.61
KLF9-201ENST00000377126 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.32■■■□□ 2.6
KLF9-201ENST00000377126 PABPN1Q86U42 306 aaKnown RBP eCLIP31.29■■■□□ 2.6
KLF9-201ENST00000377126 ITGAEP38570 1179 aa31.24■■■□□ 2.59
KLF9-201ENST00000377126 NEFLP07196 543 aa31.12■■■□□ 2.57
KLF9-201ENST00000377126 SCRIBQ14160 1630 aa31.09■■■□□ 2.57
KLF9-201ENST00000377126 DIEXFQ68CQ4 756 aaKnown RBP31■■■□□ 2.55
KLF9-201ENST00000377126 ERICH6Q7L0X2 663 aa30.94■■■□□ 2.54
KLF9-201ENST00000377126 DCAF1Q9Y4B6 1507 aa30.91■■■□□ 2.54
KLF9-201ENST00000377126 CSRNP3Q8WYN3 585 aa30.79■■■□□ 2.52
KLF9-201ENST00000377126 MYO15BQ96JP2 1530 aa30.64■■■□□ 2.5
KLF9-201ENST00000377126 FAM50AQ14320 339 aaKnown RBP30.62■■■□□ 2.49
KLF9-201ENST00000377126 RSF1Q96T23 1441 aaPredicted RBP30.47■■■□□ 2.47
KLF9-201ENST00000377126 ZNF316A6NFI3 1004 aaPredicted RBP30.47■■■□□ 2.47
KLF9-201ENST00000377126 POLR3GLQ9BT43 218 aa30.43■■■□□ 2.46
KLF9-201ENST00000377126 NEUROD1Q13562 356 aa30.35■■■□□ 2.45
KLF9-201ENST00000377126 GTF3C3Q9Y5Q9 886 aa30.32■■■□□ 2.44
KLF9-201ENST00000377126 TRIM52Q96A61 297 aa30.23■■■□□ 2.43
KLF9-201ENST00000377126 RB1CC1Q8TDY2 1594 aa30.18■■■□□ 2.42
KLF9-201ENST00000377126 CNGB1Q14028 1251 aaPredicted RBP30.18■■■□□ 2.42
KLF9-201ENST00000377126 ACIN1Q9UKV3 1341 aaKnown RBP30.16■■■□□ 2.42
KLF9-201ENST00000377126 NACADO15069 1562 aa30.16■■■□□ 2.42
KLF9-201ENST00000377126 MYT1LQ9UL68 1186 aa30.15■■■□□ 2.42
KLF9-201ENST00000377126 P3H3Q8IVL6 736 aa30.13■■■□□ 2.41
KLF9-201ENST00000377126 ANP32CO43423 234 aa30.01■■■□□ 2.39
KLF9-201ENST00000377126 EEA1Q15075 1411 aa29.93■■■□□ 2.38
KLF9-201ENST00000377126 CLIP1P30622 1438 aa29.87■■■□□ 2.37
KLF9-201ENST00000377126 CEP162Q5TB80 1403 aa29.86■■■□□ 2.37
KLF9-201ENST00000377126 BCANQ96GW7 911 aa29.82■■■□□ 2.36
KLF9-201ENST00000377126 GOLGA3Q08378 1498 aa29.82■■■□□ 2.36
KLF9-201ENST00000377126 CECR2Q9BXF3 1484 aa29.81■■■□□ 2.36
KLF9-201ENST00000377126 BAZ1AQ9NRL2 1556 aaPredicted RBP29.77■■■□□ 2.36
KLF9-201ENST00000377126 FBLN2P98095 1184 aa29.76■■■□□ 2.35
KLF9-201ENST00000377126 WRNQ14191 1432 aaPredicted RBP eCLIP29.76■■■□□ 2.35
KLF9-201ENST00000377126 ZNF326Q5BKZ1 582 aaKnown RBP29.75■■■□□ 2.35
KLF9-201ENST00000377126 DAXXQ9UER7 740 aaPredicted RBP29.74■■■□□ 2.35
KLF9-201ENST00000377126 ARID3CA6NKF2 412 aa29.73■■■□□ 2.35
KLF9-201ENST00000377126 TNIKQ9UKE5 1360 aa29.7■■■□□ 2.35
KLF9-201ENST00000377126 BAZ1BQ9UIG0 1483 aaKnown RBP29.6■■■□□ 2.33
KLF9-201ENST00000377126 TONSLQ96HA7 1378 aa29.59■■■□□ 2.33
KLF9-201ENST00000377126 CDK11AQ9UQ88 783 aaPredicted RBP29.56■■■□□ 2.32
KLF9-201ENST00000377126 CEP164Q9UPV0 1460 aa29.55■■■□□ 2.32
KLF9-201ENST00000377126 SLC4A1APQ9BWU0 796 aaKnown RBP29.54■■■□□ 2.32
KLF9-201ENST00000377126 MROH2BQ7Z745 1585 aa29.52■■■□□ 2.32
KLF9-201ENST00000377126 CLSPNQ9HAW4 1339 aa29.52■■■□□ 2.32
KLF9-201ENST00000377126 ZNF777Q9ULD5 760 aaPredicted RBP29.48■■■□□ 2.31
KLF9-201ENST00000377126 SCAF1Q9H7N4 1312 aaKnown RBP29.46■■■□□ 2.31
KLF9-201ENST00000377126 DDX10Q13206 875 aaKnown RBP29.46■■■□□ 2.31
KLF9-201ENST00000377126 MIER1Q8N108 512 aa29.44■■■□□ 2.3
KLF9-201ENST00000377126 SOGA1O94964 1423 aa29.37■■■□□ 2.29
KLF9-201ENST00000377126 KIF27Q86VH2 1401 aa29.37■■■□□ 2.29
KLF9-201ENST00000377126 MTUS2Q5JR59 1369 aa29.37■■■□□ 2.29
KLF9-201ENST00000377126 RTL5Q5HYW3 569 aaPredicted RBP29.33■■■□□ 2.29
KLF9-201ENST00000377126 CHIC2Q9UKJ5 165 aa29.31■■■□□ 2.28
KLF9-201ENST00000377126 CCDC88BA6NC98 1476 aa29.3■■■□□ 2.28
KLF9-201ENST00000377126 FKBP8Q14318 412 aa29.28■■■□□ 2.28
KLF9-201ENST00000377126 ABCC8Q09428 1581 aa29.22■■■□□ 2.27
KLF9-201ENST00000377126 HNRNPUQ00839 825 aaKnown RBP eCLIP29.21■■■□□ 2.27
KLF9-201ENST00000377126 WIZO95785 1651 aa29.15■■■□□ 2.26
KLF9-201ENST00000377126 TOP2AP11388 1531 aaKnown RBP29.07■■■□□ 2.24
KLF9-201ENST00000377126 HIRIP3Q9BW71 556 aaPredicted RBP29.07■■■□□ 2.24
KLF9-201ENST00000377126 FAM9BQ8IZU0 186 aa29.07■■■□□ 2.24
KLF9-201ENST00000377126 RRP7BPQ9NSQ0 103 aa29.02■■■□□ 2.24
KLF9-201ENST00000377126 VPS8Q8N3P4 1428 aa29.02■■■□□ 2.24
KLF9-201ENST00000377126 CCNB3Q8WWL7 1395 aa28.95■■■□□ 2.22
KLF9-201ENST00000377126 EIF4G2P78344 907 aaKnown RBP eCLIP28.93■■■□□ 2.22
KLF9-201ENST00000377126 CHMP7Q8WUX9 453 aaPredicted RBP28.93■■■□□ 2.22
KLF9-201ENST00000377126 TSPY4P0CV99 314 aa28.93■■■□□ 2.22
KLF9-201ENST00000377126 TSPY10P0CW01 314 aa28.93■■■□□ 2.22
KLF9-201ENST00000377126 SMARCA2P51531 1590 aa28.92■■■□□ 2.22
KLF9-201ENST00000377126 MRS2Q9HD23 443 aa28.9■■■□□ 2.22
KLF9-201ENST00000377126 CUX2O14529 1486 aa28.89■■■□□ 2.22
KLF9-201ENST00000377126 CANXP27824 592 aaKnown RBP28.89■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms