RNA–Protein interactions for RNA: ENST00000352385.2

IGDCC4-201, Transcript of immunoglobulin superfamily DCC subclass member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IGDCC4, Length 6,508 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGDCC4-201ENST00000352385 DCAF8L2P0C7V8 631 aa35.94■■■■□ 3.34
IGDCC4-201ENST00000352385 SUPT5HO00267 1087 aaKnown RBP34.17■■■■□ 3.06
IGDCC4-201ENST00000352385 EHMT2Q96KQ7 1210 aa33.6■■■□□ 2.97
IGDCC4-201ENST00000352385 SHROOM4Q9ULL8 1493 aa33.43■■■□□ 2.94
IGDCC4-201ENST00000352385 PELP1Q8IZL8 1130 aaKnown RBP33.28■■■□□ 2.92
IGDCC4-201ENST00000352385 NISCHQ9Y2I1 1504 aa32.86■■■□□ 2.85
IGDCC4-201ENST00000352385 APLP2Q06481 763 aa32.77■■■□□ 2.84
IGDCC4-201ENST00000352385 TTBK1Q5TCY1 1321 aaPredicted RBP32.5■■■□□ 2.79
IGDCC4-201ENST00000352385 FAM9AQ8IZU1 332 aaPredicted RBP32.4■■■□□ 2.78
IGDCC4-201ENST00000352385 PCGF6Q9BYE7 350 aa32.19■■■□□ 2.74
IGDCC4-201ENST00000352385 ERICH6Q7L0X2 663 aa32.14■■■□□ 2.73
IGDCC4-201ENST00000352385 RANGAP1P46060 587 aaPredicted RBP32■■■□□ 2.71
IGDCC4-201ENST00000352385 CENPBP07199 599 aaPredicted RBP31.9■■■□□ 2.7
IGDCC4-201ENST00000352385 CCER1Q8TC90 406 aaPredicted RBP31.81■■■□□ 2.68
IGDCC4-201ENST00000352385 ATP1B4Q9UN42 357 aaPredicted RBP31.72■■■□□ 2.67
IGDCC4-201ENST00000352385 ZEB1P37275 1124 aaPredicted RBP31.62■■■□□ 2.65
IGDCC4-201ENST00000352385 TRIM41Q8WV44 630 aa31.51■■■□□ 2.63
IGDCC4-201ENST00000352385 YTHDC1Q96MU7 727 aaKnown RBP31.44■■■□□ 2.62
IGDCC4-201ENST00000352385 NEFLP07196 543 aa31.35■■■□□ 2.61
IGDCC4-201ENST00000352385 UBTFP17480 764 aaKnown RBP31.32■■■□□ 2.6
IGDCC4-201ENST00000352385 MYT1Q01538 1121 aa31.07■■■□□ 2.56
IGDCC4-201ENST00000352385 PPARGC1BQ86YN6 1023 aaKnown RBP31.05■■■□□ 2.56
IGDCC4-201ENST00000352385 POLR3GLQ9BT43 218 aa30.66■■■□□ 2.5
IGDCC4-201ENST00000352385 DAXXQ9UER7 740 aaPredicted RBP30.64■■■□□ 2.5
IGDCC4-201ENST00000352385 ITGAEP38570 1179 aa30.59■■■□□ 2.49
IGDCC4-201ENST00000352385 TRIM26Q12899 539 aaPredicted RBP30.57■■■□□ 2.48
IGDCC4-201ENST00000352385 MYT1LQ9UL68 1186 aa30.54■■■□□ 2.48
IGDCC4-201ENST00000352385 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.43■■■□□ 2.46
IGDCC4-201ENST00000352385 HNRNPUL2Q1KMD3 747 aaKnown RBP30.43■■■□□ 2.46
IGDCC4-201ENST00000352385 CNGB1Q14028 1251 aaPredicted RBP30.43■■■□□ 2.46
IGDCC4-201ENST00000352385 HRCP23327 699 aa30.37■■■□□ 2.45
IGDCC4-201ENST00000352385 CHIC1Q5VXU3 224 aa30.16■■■□□ 2.42
IGDCC4-201ENST00000352385 LOC105371045A0A1W2PR82 267 aa30.14■■■□□ 2.41
IGDCC4-201ENST00000352385 SLC4A1APQ9BWU0 796 aaKnown RBP30.1■■■□□ 2.41
IGDCC4-201ENST00000352385 ZNF316A6NFI3 1004 aaPredicted RBP29.95■■■□□ 2.38
IGDCC4-201ENST00000352385 CLSPNQ9HAW4 1339 aa29.9■■■□□ 2.38
IGDCC4-201ENST00000352385 RTL5Q5HYW3 569 aaPredicted RBP29.87■■■□□ 2.37
IGDCC4-201ENST00000352385 DIEXFQ68CQ4 756 aaKnown RBP29.78■■■□□ 2.36
IGDCC4-201ENST00000352385 FAM50AQ14320 339 aaKnown RBP29.68■■■□□ 2.34
IGDCC4-201ENST00000352385 TRIM52Q96A61 297 aa29.59■■■□□ 2.33
IGDCC4-201ENST00000352385 BCANQ96GW7 911 aa29.56■■■□□ 2.32
IGDCC4-201ENST00000352385 NEUROD1Q13562 356 aa29.55■■■□□ 2.32
IGDCC4-201ENST00000352385 ZNF326Q5BKZ1 582 aaKnown RBP29.36■■■□□ 2.29
IGDCC4-201ENST00000352385 GTF3C3Q9Y5Q9 886 aa29.3■■■□□ 2.28
IGDCC4-201ENST00000352385 ANP32CO43423 234 aa29.28■■■□□ 2.28
IGDCC4-201ENST00000352385 ZBTB47Q9UFB7 747 aaPredicted RBP29.25■■■□□ 2.27
IGDCC4-201ENST00000352385 CDK11AQ9UQ88 783 aaPredicted RBP29.25■■■□□ 2.27
IGDCC4-201ENST00000352385 BCL11AQ9H165 835 aa29.22■■■□□ 2.27
IGDCC4-201ENST00000352385 SLC24A1O60721 1099 aa29.14■■■□□ 2.26
IGDCC4-201ENST00000352385 CANXP27824 592 aaKnown RBP29.12■■■□□ 2.25
IGDCC4-201ENST00000352385 PABPN1Q86U42 306 aaKnown RBP eCLIP29■■■□□ 2.23
IGDCC4-201ENST00000352385 FBLN2P98095 1184 aa28.93■■■□□ 2.22
IGDCC4-201ENST00000352385 NEFMP07197 916 aa28.84■■■□□ 2.21
IGDCC4-201ENST00000352385 ARID3CA6NKF2 412 aa28.83■■■□□ 2.21
IGDCC4-201ENST00000352385 NPM2Q86SE8 214 aaKnown RBP28.82■■■□□ 2.2
IGDCC4-201ENST00000352385 ANP32AP39687 249 aaKnown RBP28.79■■■□□ 2.2
IGDCC4-201ENST00000352385 P3H3Q8IVL6 736 aa28.77■■■□□ 2.2
IGDCC4-201ENST00000352385 ABCC9O60706 1549 aa28.7■■■□□ 2.19
IGDCC4-201ENST00000352385 ACIN1Q9UKV3 1341 aaKnown RBP28.68■■■□□ 2.18
IGDCC4-201ENST00000352385 ZNF777Q9ULD5 760 aaPredicted RBP28.64■■■□□ 2.18
IGDCC4-201ENST00000352385 EIF5BO60841 1220 aaKnown RBP28.58■■■□□ 2.17
IGDCC4-201ENST00000352385 FKBP8Q14318 412 aa28.51■■■□□ 2.15
IGDCC4-201ENST00000352385 HSP90AA1P07900 732 aaKnown RBP28.45■■■□□ 2.15
IGDCC4-201ENST00000352385 ANP32BQ92688 251 aaKnown RBP28.45■■■□□ 2.14
IGDCC4-201ENST00000352385 CHGAP10645 457 aaKnown RBP28.36■■■□□ 2.13
IGDCC4-201ENST00000352385 CSRNP3Q8WYN3 585 aa28.35■■■□□ 2.13
IGDCC4-201ENST00000352385 FAM9BQ8IZU0 186 aa28.35■■■□□ 2.13
IGDCC4-201ENST00000352385 HNRNPUQ00839 825 aaKnown RBP eCLIP28.34■■■□□ 2.13
IGDCC4-201ENST00000352385 SALL2Q9Y467 1007 aaPredicted RBP28.33■■■□□ 2.13
IGDCC4-201ENST00000352385 TONSLQ96HA7 1378 aa28.32■■■□□ 2.12
IGDCC4-201ENST00000352385 UPF2Q9HAU5 1272 aaKnown RBP28.31■■■□□ 2.12
IGDCC4-201ENST00000352385 PLPPR3Q6T4P5 718 aa28.28■■■□□ 2.12
IGDCC4-201ENST00000352385 ESF1Q9H501 851 aaKnown RBP28.27■■■□□ 2.12
IGDCC4-201ENST00000352385 STAG3Q9UJ98 1225 aa28.27■■■□□ 2.12
IGDCC4-201ENST00000352385 DDX10Q13206 875 aaKnown RBP28.24■■■□□ 2.11
IGDCC4-201ENST00000352385 NBR1Q14596 966 aa28.18■■■□□ 2.1
IGDCC4-201ENST00000352385 ARXQ96QS3 562 aa28.15■■■□□ 2.1
IGDCC4-201ENST00000352385 CCDC136Q96JN2 1154 aa28.1■■■□□ 2.09
IGDCC4-201ENST00000352385 TMC1Q8TDI8 760 aa28.06■■■□□ 2.08
IGDCC4-201ENST00000352385 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.05■■■□□ 2.08
IGDCC4-201ENST00000352385 CHIC2Q9UKJ5 165 aa28.05■■■□□ 2.08
IGDCC4-201ENST00000352385 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.02■■■□□ 2.08
IGDCC4-201ENST00000352385 WDR43Q15061 677 aaKnown RBP eCLIP28.01■■■□□ 2.07
IGDCC4-201ENST00000352385 IRX6P78412 446 aaPredicted RBP27.95■■■□□ 2.07
IGDCC4-201ENST00000352385 KDM2AQ9Y2K7 1162 aa27.94■■■□□ 2.06
IGDCC4-201ENST00000352385 GLIPR1L2Q4G1C9 344 aa27.94■■■□□ 2.06
IGDCC4-201ENST00000352385 MRS2Q9HD23 443 aa27.92■■■□□ 2.06
IGDCC4-201ENST00000352385 NPM1P06748 294 aaKnown RBP eCLIP27.85■■■□□ 2.05
IGDCC4-201ENST00000352385 SCAF1Q9H7N4 1312 aaKnown RBP27.84■■■□□ 2.05
IGDCC4-201ENST00000352385 HIRIP3Q9BW71 556 aaPredicted RBP27.82■■■□□ 2.04
IGDCC4-201ENST00000352385 MYH16Q9H6N6 1097 aa27.79■■■□□ 2.04
IGDCC4-201ENST00000352385 SCRIBQ14160 1630 aa27.76■■■□□ 2.03
IGDCC4-201ENST00000352385 SENP3Q9H4L4 574 aaPredicted RBP27.75■■■□□ 2.03
IGDCC4-201ENST00000352385 DCAF1Q9Y4B6 1507 aa27.75■■■□□ 2.03
IGDCC4-201ENST00000352385 MIER1Q8N108 512 aa27.73■■■□□ 2.03
IGDCC4-201ENST00000352385 A0A0G2JS52 829 aa27.73■■■□□ 2.03
IGDCC4-201ENST00000352385 ZBTB7CA1YPR0 619 aa27.73■■■□□ 2.03
IGDCC4-201ENST00000352385 PLEKHG5O94827 1062 aa27.69■■■□□ 2.02
IGDCC4-201ENST00000352385 TSPY4P0CV99 314 aa27.68■■■□□ 2.02
IGDCC4-201ENST00000352385 TSPY10P0CW01 314 aa27.68■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms