RNA–Protein interactions for RNA: ENST00000378755.9

ATAD3A-202, Transcript of ATPase family, AAA domain containing 3A, humanhuman

TSL 2 BASIC

Gene ATAD3A, Length 2,612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATAD3A-202ENST00000378755 NISCHQ9Y2I1 1504 aa41.25■■■■■ 4.19
ATAD3A-202ENST00000378755 HRCP23327 699 aa35.24■■■■□ 3.23
ATAD3A-202ENST00000378755 CCDC180Q9P1Z9 1646 aa35.23■■■■□ 3.23
ATAD3A-202ENST00000378755 ZCCHC6Q5VYS8 1495 aaKnown RBP34.89■■■■□ 3.18
ATAD3A-202ENST00000378755 SHROOM4Q9ULL8 1493 aa34.84■■■■□ 3.17
ATAD3A-202ENST00000378755 PPARGC1BQ86YN6 1023 aaKnown RBP34.76■■■■□ 3.16
ATAD3A-202ENST00000378755 PCGF6Q9BYE7 350 aa34.48■■■■□ 3.11
ATAD3A-202ENST00000378755 SUPT5HO00267 1087 aaKnown RBP34.27■■■■□ 3.08
ATAD3A-202ENST00000378755 PELP1Q8IZL8 1130 aaKnown RBP34.26■■■■□ 3.08
ATAD3A-202ENST00000378755 MYO15BQ96JP2 1530 aa34.15■■■■□ 3.06
ATAD3A-202ENST00000378755 DCAF1Q9Y4B6 1507 aa33.97■■■■□ 3.03
ATAD3A-202ENST00000378755 DCAF8L2P0C7V8 631 aa33.95■■■■□ 3.03
ATAD3A-202ENST00000378755 CHIC1Q5VXU3 224 aa33.72■■■□□ 2.99
ATAD3A-202ENST00000378755 SCAF1Q9H7N4 1312 aaKnown RBP33.66■■■□□ 2.98
ATAD3A-202ENST00000378755 LOC105371045A0A1W2PR82 267 aa33.15■■■□□ 2.9
ATAD3A-202ENST00000378755 TRIM26Q12899 539 aaPredicted RBP33.09■■■□□ 2.89
ATAD3A-202ENST00000378755 MYT1Q01538 1121 aa32.92■■■□□ 2.86
ATAD3A-202ENST00000378755 ABCC9O60706 1549 aa32.91■■■□□ 2.86
ATAD3A-202ENST00000378755 SCRIBQ14160 1630 aa32.81■■■□□ 2.84
ATAD3A-202ENST00000378755 ZEB1P37275 1124 aaPredicted RBP32.8■■■□□ 2.84
ATAD3A-202ENST00000378755 NEUROD1Q13562 356 aa32.61■■■□□ 2.81
ATAD3A-202ENST00000378755 ACIN1Q9UKV3 1341 aaKnown RBP32.61■■■□□ 2.81
ATAD3A-202ENST00000378755 NACADO15069 1562 aa32.56■■■□□ 2.8
ATAD3A-202ENST00000378755 RSF1Q96T23 1441 aaPredicted RBP32.55■■■□□ 2.8
ATAD3A-202ENST00000378755 GTF3C3Q9Y5Q9 886 aa32.45■■■□□ 2.79
ATAD3A-202ENST00000378755 RB1CC1Q8TDY2 1594 aa32.25■■■□□ 2.75
ATAD3A-202ENST00000378755 CECR2Q9BXF3 1484 aa32.07■■■□□ 2.72
ATAD3A-202ENST00000378755 CENPBP07199 599 aaPredicted RBP32.04■■■□□ 2.72
ATAD3A-202ENST00000378755 MROH2BQ7Z745 1585 aa31.99■■■□□ 2.71
ATAD3A-202ENST00000378755 TRIM41Q8WV44 630 aa31.9■■■□□ 2.7
ATAD3A-202ENST00000378755 DIEXFQ68CQ4 756 aaKnown RBP31.88■■■□□ 2.69
ATAD3A-202ENST00000378755 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.86■■■□□ 2.69
ATAD3A-202ENST00000378755 WIZO95785 1651 aa31.81■■■□□ 2.68
ATAD3A-202ENST00000378755 EHMT2Q96KQ7 1210 aa31.81■■■□□ 2.68
ATAD3A-202ENST00000378755 FAM9AQ8IZU1 332 aaPredicted RBP31.77■■■□□ 2.68
ATAD3A-202ENST00000378755 BAZ1AQ9NRL2 1556 aaPredicted RBP31.71■■■□□ 2.67
ATAD3A-202ENST00000378755 CCER1Q8TC90 406 aaPredicted RBP31.71■■■□□ 2.67
ATAD3A-202ENST00000378755 YTHDC1Q96MU7 727 aaKnown RBP31.6■■■□□ 2.65
ATAD3A-202ENST00000378755 UNC13AQ9UPW8 1703 aa31.48■■■□□ 2.63
ATAD3A-202ENST00000378755 SMARCA4P51532 1647 aa31.44■■■□□ 2.62
ATAD3A-202ENST00000378755 EIF4G1Q04637 1599 aaKnown RBP31.43■■■□□ 2.62
ATAD3A-202ENST00000378755 TOP2AP11388 1531 aaKnown RBP31.41■■■□□ 2.62
ATAD3A-202ENST00000378755 CCDC88BA6NC98 1476 aa31.2■■■□□ 2.59
ATAD3A-202ENST00000378755 SMARCA2P51531 1590 aa31.19■■■□□ 2.58
ATAD3A-202ENST00000378755 BCL11AQ9H165 835 aa31.16■■■□□ 2.58
ATAD3A-202ENST00000378755 ZNF316A6NFI3 1004 aaPredicted RBP31.13■■■□□ 2.57
ATAD3A-202ENST00000378755 TTBK1Q5TCY1 1321 aaPredicted RBP31.11■■■□□ 2.57
ATAD3A-202ENST00000378755 MIER1Q8N108 512 aa31.11■■■□□ 2.57
ATAD3A-202ENST00000378755 BICRAQ9NZM4 1560 aa31.09■■■□□ 2.57
ATAD3A-202ENST00000378755 ABCC8Q09428 1581 aa31.02■■■□□ 2.56
ATAD3A-202ENST00000378755 PABPN1Q86U42 306 aaKnown RBP eCLIP30.96■■■□□ 2.552e-6■■■■□ 20.4
ATAD3A-202ENST00000378755 PEG3Q9GZU2 1588 aa30.91■■■□□ 2.54
ATAD3A-202ENST00000378755 ANP32EQ9BTT0 268 aa30.9■■■□□ 2.54
ATAD3A-202ENST00000378755 SUPT16HQ9Y5B9 1047 aaKnown RBP30.75■■■□□ 2.51
ATAD3A-202ENST00000378755 TSHZ2Q9NRE2 1034 aa30.74■■■□□ 2.51
ATAD3A-202ENST00000378755 EEA1Q15075 1411 aa30.73■■■□□ 2.51
ATAD3A-202ENST00000378755 SOGA1O94964 1423 aa30.71■■■□□ 2.51
ATAD3A-202ENST00000378755 CSRNP3Q8WYN3 585 aa30.71■■■□□ 2.51
ATAD3A-202ENST00000378755 ATAD2BQ9ULI0 1458 aa30.63■■■□□ 2.49
ATAD3A-202ENST00000378755 WRNQ14191 1432 aaPredicted RBP eCLIP30.61■■■□□ 2.49
ATAD3A-202ENST00000378755 TNIKQ9UKE5 1360 aa30.6■■■□□ 2.49
ATAD3A-202ENST00000378755 CEP162Q5TB80 1403 aa30.58■■■□□ 2.49
ATAD3A-202ENST00000378755 BAZ1BQ9UIG0 1483 aaKnown RBP30.54■■■□□ 2.48
ATAD3A-202ENST00000378755 RUSC2Q8N2Y8 1516 aa30.54■■■□□ 2.48
ATAD3A-202ENST00000378755 GOLGA3Q08378 1498 aa30.44■■■□□ 2.46
ATAD3A-202ENST00000378755 SYNJ1O43426 1573 aa30.43■■■□□ 2.46
ATAD3A-202ENST00000378755 UBTFP17480 764 aaKnown RBP30.38■■■□□ 2.45
ATAD3A-202ENST00000378755 CLSPNQ9HAW4 1339 aa30.33■■■□□ 2.45
ATAD3A-202ENST00000378755 HNRNPUL2Q1KMD3 747 aaKnown RBP30.29■■■□□ 2.44
ATAD3A-202ENST00000378755 CEP164Q9UPV0 1460 aa30.29■■■□□ 2.44
ATAD3A-202ENST00000378755 KIF21BO75037 1637 aa30.29■■■□□ 2.44
ATAD3A-202ENST00000378755 BCANQ96GW7 911 aa30.23■■■□□ 2.43
ATAD3A-202ENST00000378755 TOP2BQ02880 1626 aa30.14■■■□□ 2.42
ATAD3A-202ENST00000378755 HMGXB3Q12766 1538 aa30.12■■■□□ 2.41
ATAD3A-202ENST00000378755 PRKCSHP14314 528 aaPredicted RBP30.1■■■□□ 2.41
ATAD3A-202ENST00000378755 NCAPD3P42695 1498 aa30.09■■■□□ 2.41
ATAD3A-202ENST00000378755 BIVM-ERCC5R4GMW8 1640 aa30.06■■■□□ 2.4
ATAD3A-202ENST00000378755 CLIP1P30622 1438 aa30.04■■■□□ 2.4
ATAD3A-202ENST00000378755 RAPGEF2Q9Y4G8 1499 aa30■■■□□ 2.39
ATAD3A-202ENST00000378755 RBM19Q9Y4C8 960 aaKnown RBP29.95■■■□□ 2.39
ATAD3A-202ENST00000378755 KCNH8Q96L42 1107 aa29.94■■■□□ 2.38
ATAD3A-202ENST00000378755 VPS8Q8N3P4 1428 aa29.93■■■□□ 2.38
ATAD3A-202ENST00000378755 FKBP8Q14318 412 aa29.91■■■□□ 2.38
ATAD3A-202ENST00000378755 ERICH3Q5RHP9 1530 aa29.84■■■□□ 2.37
ATAD3A-202ENST00000378755 CUX1P39880 1505 aa29.81■■■□□ 2.36
ATAD3A-202ENST00000378755 CFTRP13569 1480 aa29.81■■■□□ 2.36
ATAD3A-202ENST00000378755 MSH5O43196 834 aa29.81■■■□□ 2.36
ATAD3A-202ENST00000378755 PRXQ9BXM0 1461 aa29.79■■■□□ 2.36
ATAD3A-202ENST00000378755 ITGAEP38570 1179 aa29.76■■■□□ 2.35
ATAD3A-202ENST00000378755 APLP2Q06481 763 aa29.75■■■□□ 2.35
ATAD3A-202ENST00000378755 KIF27Q86VH2 1401 aa29.68■■■□□ 2.34
ATAD3A-202ENST00000378755 RANGAP1P46060 587 aaPredicted RBP29.65■■■□□ 2.34
ATAD3A-202ENST00000378755 PRDM2Q13029 1718 aa29.64■■■□□ 2.34
ATAD3A-202ENST00000378755 ARAP1Q96P48 1450 aa29.58■■■□□ 2.33
ATAD3A-202ENST00000378755 DHX57Q6P158 1386 aaKnown RBP29.57■■■□□ 2.32
ATAD3A-202ENST00000378755 NEFLP07196 543 aa29.5■■■□□ 2.31
ATAD3A-202ENST00000378755 CADPSQ9ULU8 1353 aa29.47■■■□□ 2.31
ATAD3A-202ENST00000378755 ERICH6Q7L0X2 663 aa29.44■■■□□ 2.3
ATAD3A-202ENST00000378755 TRIM52Q96A61 297 aa29.37■■■□□ 2.29
ATAD3A-202ENST00000378755 CUX2O14529 1486 aa29.37■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms