Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
TUBA1AQ71U36 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
TUBA1AQ71U36 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC23.95■■□□□ 1.42
TUBA1AQ71U36 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC23.95■■□□□ 1.42
TUBA1AQ71U36 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
TUBA1AQ71U36 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
TUBA1AQ71U36 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
TUBA1AQ71U36 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
TUBA1AQ71U36 CREM-210ENST00000374721 2020 ntTSL 5 BASIC23.94■■□□□ 1.42
TUBA1AQ71U36 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
TUBA1AQ71U36 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
TUBA1AQ71U36 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
TUBA1AQ71U36 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
TUBA1AQ71U36 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
TUBA1AQ71U36 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
TUBA1AQ71U36 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
TUBA1AQ71U36 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC23.93■■□□□ 1.42
TUBA1AQ71U36 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC23.93■■□□□ 1.42
TUBA1AQ71U36 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
TUBA1AQ71U36 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
TUBA1AQ71U36 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
TUBA1AQ71U36 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
TUBA1AQ71U36 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
TUBA1AQ71U36 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
TUBA1AQ71U36 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC23.9■■□□□ 1.42
TUBA1AQ71U36 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
TUBA1AQ71U36 AC135731.1-201ENST00000569415 2548 ntBASIC23.89■■□□□ 1.42
TUBA1AQ71U36 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
TUBA1AQ71U36 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
TUBA1AQ71U36 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TUBA1AQ71U36 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
TUBA1AQ71U36 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
TUBA1AQ71U36 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC23.86■■□□□ 1.41
TUBA1AQ71U36 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
TUBA1AQ71U36 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC23.86■■□□□ 1.41
TUBA1AQ71U36 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC23.86■■□□□ 1.41
TUBA1AQ71U36 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC23.86■■□□□ 1.41
TUBA1AQ71U36 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
TUBA1AQ71U36 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
TUBA1AQ71U36 CAHM-201ENST00000604200 896 ntBASIC23.85■■□□□ 1.41
TUBA1AQ71U36 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC23.85■■□□□ 1.41
TUBA1AQ71U36 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TUBA1AQ71U36 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
TUBA1AQ71U36 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TUBA1AQ71U36 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC23.84■■□□□ 1.41
TUBA1AQ71U36 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
TUBA1AQ71U36 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
TUBA1AQ71U36 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TUBA1AQ71U36 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
TUBA1AQ71U36 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TUBA1AQ71U36 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TUBA1AQ71U36 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
TUBA1AQ71U36 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TUBA1AQ71U36 AL121749.1-202ENST00000609313 2153 ntBASIC23.8■■□□□ 1.4
TUBA1AQ71U36 AL391121.1-201ENST00000607967 1349 ntBASIC23.8■■□□□ 1.4
TUBA1AQ71U36 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TUBA1AQ71U36 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
TUBA1AQ71U36 SUZ12P1-203ENST00000578195 985 ntBASIC23.79■■□□□ 1.4
TUBA1AQ71U36 SHF-207ENST00000560540 2062 ntTSL 5 BASIC23.79■■□□□ 1.4
TUBA1AQ71U36 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
TUBA1AQ71U36 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
TUBA1AQ71U36 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC23.78■■□□□ 1.4
TUBA1AQ71U36 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TUBA1AQ71U36 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TUBA1AQ71U36 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC23.76■■□□□ 1.39
TUBA1AQ71U36 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TUBA1AQ71U36 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TUBA1AQ71U36 WASH5P-204ENST00000632292 975 ntBASIC23.75■■□□□ 1.39
TUBA1AQ71U36 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
TUBA1AQ71U36 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
TUBA1AQ71U36 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TUBA1AQ71U36 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TUBA1AQ71U36 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TUBA1AQ71U36 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
TUBA1AQ71U36 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TUBA1AQ71U36 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TUBA1AQ71U36 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC23.73■■□□□ 1.39
TUBA1AQ71U36 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC23.73■■□□□ 1.39
TUBA1AQ71U36 EBPL-202ENST00000378268 680 ntTSL 3 BASIC23.72■■□□□ 1.39
TUBA1AQ71U36 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TUBA1AQ71U36 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC23.72■■□□□ 1.39
TUBA1AQ71U36 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
TUBA1AQ71U36 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TUBA1AQ71U36 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC23.71■■□□□ 1.39
TUBA1AQ71U36 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
TUBA1AQ71U36 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
TUBA1AQ71U36 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
TUBA1AQ71U36 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TUBA1AQ71U36 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
TUBA1AQ71U36 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
TUBA1AQ71U36 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
TUBA1AQ71U36 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TUBA1AQ71U36 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
TUBA1AQ71U36 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
TUBA1AQ71U36 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC23.68■■□□□ 1.38
TUBA1AQ71U36 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TUBA1AQ71U36 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC23.67■■□□□ 1.38
TUBA1AQ71U36 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC23.67■■□□□ 1.38
TUBA1AQ71U36 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TUBA1AQ71U36 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms