Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC31.39■■■□□ 2.61
RNF20Q5VTR2 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC31.38■■■□□ 2.61
RNF20Q5VTR2 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
RNF20Q5VTR2 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC31.37■■■□□ 2.61
RNF20Q5VTR2 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
RNF20Q5VTR2 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
RNF20Q5VTR2 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
RNF20Q5VTR2 MIR762-201ENST00000390236 83 ntBASIC31.36■■■□□ 2.61
RNF20Q5VTR2 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
RNF20Q5VTR2 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
RNF20Q5VTR2 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC31.35■■■□□ 2.61
RNF20Q5VTR2 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
RNF20Q5VTR2 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC31.34■■■□□ 2.61
RNF20Q5VTR2 CHML-205ENST00000638160 705 ntTSL 3 BASIC31.34■■■□□ 2.61
RNF20Q5VTR2 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
RNF20Q5VTR2 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC31.34■■■□□ 2.61
RNF20Q5VTR2 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC31.33■■■□□ 2.61
RNF20Q5VTR2 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
RNF20Q5VTR2 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC31.33■■■□□ 2.61
RNF20Q5VTR2 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
RNF20Q5VTR2 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
RNF20Q5VTR2 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
RNF20Q5VTR2 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC31.31■■■□□ 2.6
RNF20Q5VTR2 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
RNF20Q5VTR2 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC31.3■■■□□ 2.6
RNF20Q5VTR2 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
RNF20Q5VTR2 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC31.29■■■□□ 2.6
RNF20Q5VTR2 AC139426.1-201ENST00000568218 2529 ntBASIC31.29■■■□□ 2.6
RNF20Q5VTR2 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
RNF20Q5VTR2 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
RNF20Q5VTR2 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
RNF20Q5VTR2 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC31.28■■■□□ 2.6
RNF20Q5VTR2 HNRNPLP2-201ENST00000568980 1570 ntBASIC31.27■■■□□ 2.6
RNF20Q5VTR2 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
RNF20Q5VTR2 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC31.27■■■□□ 2.6
RNF20Q5VTR2 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC31.27■■■□□ 2.6
RNF20Q5VTR2 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC31.27■■■□□ 2.6
RNF20Q5VTR2 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
RNF20Q5VTR2 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
RNF20Q5VTR2 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
RNF20Q5VTR2 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC31.25■■■□□ 2.59
RNF20Q5VTR2 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
RNF20Q5VTR2 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC31.25■■■□□ 2.59
RNF20Q5VTR2 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC31.24■■■□□ 2.59
RNF20Q5VTR2 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC31.23■■■□□ 2.59
RNF20Q5VTR2 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
RNF20Q5VTR2 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC31.23■■■□□ 2.59
RNF20Q5VTR2 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC31.22■■■□□ 2.59
RNF20Q5VTR2 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC31.22■■■□□ 2.59
RNF20Q5VTR2 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC31.22■■■□□ 2.59
RNF20Q5VTR2 AC005559.1-201ENST00000589661 871 ntBASIC31.21■■■□□ 2.59
RNF20Q5VTR2 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC31.2■■■□□ 2.59
RNF20Q5VTR2 RPS2-209ENST00000529806 993 ntTSL 3 BASIC31.2■■■□□ 2.59
RNF20Q5VTR2 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC31.19■■■□□ 2.58
RNF20Q5VTR2 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
RNF20Q5VTR2 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
RNF20Q5VTR2 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC31.19■■■□□ 2.58
RNF20Q5VTR2 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
RNF20Q5VTR2 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
RNF20Q5VTR2 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
RNF20Q5VTR2 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
RNF20Q5VTR2 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
RNF20Q5VTR2 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
RNF20Q5VTR2 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC31.15■■■□□ 2.58
RNF20Q5VTR2 AL139393.2-201ENST00000608721 2025 ntBASIC31.15■■■□□ 2.58
RNF20Q5VTR2 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
RNF20Q5VTR2 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
RNF20Q5VTR2 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC31.13■■■□□ 2.57
RNF20Q5VTR2 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
RNF20Q5VTR2 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
RNF20Q5VTR2 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC31.11■■■□□ 2.57
RNF20Q5VTR2 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
RNF20Q5VTR2 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC31.1■■■□□ 2.57
RNF20Q5VTR2 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC31.1■■■□□ 2.57
RNF20Q5VTR2 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
RNF20Q5VTR2 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
RNF20Q5VTR2 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
RNF20Q5VTR2 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC31.08■■■□□ 2.57
RNF20Q5VTR2 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC31.08■■■□□ 2.57
RNF20Q5VTR2 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
RNF20Q5VTR2 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
RNF20Q5VTR2 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC31.06■■■□□ 2.56
RNF20Q5VTR2 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC31.06■■■□□ 2.56
RNF20Q5VTR2 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC31.06■■■□□ 2.56
RNF20Q5VTR2 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC31.06■■■□□ 2.56
RNF20Q5VTR2 SHF-206ENST00000560471 2499 ntTSL 5 BASIC31.06■■■□□ 2.56
RNF20Q5VTR2 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC31.06■■■□□ 2.56
RNF20Q5VTR2 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC31.06■■■□□ 2.56
RNF20Q5VTR2 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC31.06■■■□□ 2.56
RNF20Q5VTR2 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC31.06■■■□□ 2.56
RNF20Q5VTR2 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC31.05■■■□□ 2.56
RNF20Q5VTR2 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC31.05■■■□□ 2.56
RNF20Q5VTR2 MIR3665-201ENST00000578708 105 ntBASIC31.04■■■□□ 2.56
RNF20Q5VTR2 AP006261.1-201ENST00000584783 668 ntBASIC31.04■■■□□ 2.56
RNF20Q5VTR2 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
RNF20Q5VTR2 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
RNF20Q5VTR2 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC31.03■■■□□ 2.56
RNF20Q5VTR2 DUX4L28-201ENST00000623687 678 ntBASIC31.03■■■□□ 2.56
RNF20Q5VTR2 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC31.01■■■□□ 2.56
RNF20Q5VTR2 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
Retrieved 100 of 98,524 protein–RNA pairs in 10 ms