Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC31.24■■■□□ 2.59
LBX1P52954 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
LBX1P52954 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
LBX1P52954 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
LBX1P52954 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC31.19■■■□□ 2.58
LBX1P52954 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC31.19■■■□□ 2.58
LBX1P52954 MTURN-203ENST00000409688 843 ntTSL 2 BASIC31.18■■■□□ 2.58
LBX1P52954 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
LBX1P52954 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC31.18■■■□□ 2.58
LBX1P52954 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
LBX1P52954 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
LBX1P52954 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
LBX1P52954 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC31.17■■■□□ 2.58
LBX1P52954 AL592295.1-201ENST00000400984 884 ntBASIC31.17■■■□□ 2.58
LBX1P52954 CHML-204ENST00000638121 920 ntTSL 2 BASIC31.17■■■□□ 2.58
LBX1P52954 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
LBX1P52954 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
LBX1P52954 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC31.13■■■□□ 2.57
LBX1P52954 RARRES2P1-201ENST00000474487 481 ntBASIC31.13■■■□□ 2.57
LBX1P52954 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC31.13■■■□□ 2.57
LBX1P52954 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
LBX1P52954 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
LBX1P52954 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC31.1■■■□□ 2.57
LBX1P52954 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC31.08■■■□□ 2.57
LBX1P52954 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC31.08■■■□□ 2.57
LBX1P52954 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
LBX1P52954 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC31.07■■■□□ 2.57
LBX1P52954 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC31.07■■■□□ 2.56
LBX1P52954 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC31.06■■■□□ 2.56
LBX1P52954 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC31.06■■■□□ 2.56
LBX1P52954 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC31.05■■■□□ 2.56
LBX1P52954 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC31.05■■■□□ 2.56
LBX1P52954 GFER-205ENST00000569451 517 ntTSL 5 BASIC31.04■■■□□ 2.56
LBX1P52954 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC31.02■■■□□ 2.56
LBX1P52954 AC022413.1-201ENST00000624602 984 ntBASIC31.02■■■□□ 2.56
LBX1P52954 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC31■■■□□ 2.55
LBX1P52954 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC31■■■□□ 2.55
LBX1P52954 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC31■■■□□ 2.55
LBX1P52954 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
LBX1P52954 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
LBX1P52954 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
LBX1P52954 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC30.99■■■□□ 2.55
LBX1P52954 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
LBX1P52954 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC30.98■■■□□ 2.55
LBX1P52954 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
LBX1P52954 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
LBX1P52954 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
LBX1P52954 CHST11-202ENST00000546689 756 ntTSL 2 BASIC30.96■■■□□ 2.55
LBX1P52954 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
LBX1P52954 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC30.94■■■□□ 2.54
LBX1P52954 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC30.94■■■□□ 2.54
LBX1P52954 U85056.1-201ENST00000616429 682 ntBASIC30.94■■■□□ 2.54
LBX1P52954 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
LBX1P52954 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
LBX1P52954 TSPY13P-201ENST00000338964 914 ntBASIC30.92■■■□□ 2.54
LBX1P52954 HES4-202ENST00000428771 1040 ntTSL 2 BASIC30.92■■■□□ 2.54
LBX1P52954 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
LBX1P52954 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
LBX1P52954 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
LBX1P52954 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
LBX1P52954 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
LBX1P52954 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
LBX1P52954 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC30.87■■■□□ 2.53
LBX1P52954 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
LBX1P52954 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
LBX1P52954 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC30.84■■■□□ 2.53
LBX1P52954 AC004987.1-201ENST00000428627 508 ntBASIC30.84■■■□□ 2.53
LBX1P52954 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC30.84■■■□□ 2.53
LBX1P52954 HYI-213ENST00000583037 1322 ntTSL 5 BASIC30.82■■■□□ 2.52
LBX1P52954 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
LBX1P52954 GUK1-208ENST00000366728 842 ntTSL 2 BASIC30.81■■■□□ 2.52
LBX1P52954 MIR935-201ENST00000401179 91 ntBASIC30.81■■■□□ 2.52
LBX1P52954 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC30.81■■■□□ 2.52
LBX1P52954 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC30.81■■■□□ 2.52
LBX1P52954 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC30.81■■■□□ 2.52
LBX1P52954 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
LBX1P52954 ATP5G2P3-201ENST00000429083 425 ntBASIC30.8■■■□□ 2.52
LBX1P52954 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC30.8■■■□□ 2.52
LBX1P52954 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
LBX1P52954 HES4-204ENST00000484667 667 ntTSL 3 BASIC30.79■■■□□ 2.52
LBX1P52954 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC30.79■■■□□ 2.52
LBX1P52954 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
LBX1P52954 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
LBX1P52954 AL035685.1-201ENST00000636663 812 ntBASIC30.78■■■□□ 2.52
LBX1P52954 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC30.76■■■□□ 2.51
LBX1P52954 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC30.75■■■□□ 2.51
LBX1P52954 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
LBX1P52954 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC30.75■■■□□ 2.51
LBX1P52954 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC30.74■■■□□ 2.51
LBX1P52954 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
LBX1P52954 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC30.73■■■□□ 2.51
LBX1P52954 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
LBX1P52954 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
LBX1P52954 EI24-212ENST00000615917 1407 ntTSL 2 BASIC30.71■■■□□ 2.51
LBX1P52954 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC30.7■■■□□ 2.51
LBX1P52954 KRT18P60-201ENST00000312876 1297 ntBASIC30.7■■■□□ 2.51
LBX1P52954 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
LBX1P52954 TRIR-205ENST00000592273 783 ntTSL 3 BASIC30.68■■■□□ 2.5
LBX1P52954 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
LBX1P52954 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms