Protein–RNA interactions for Protein: B2RNG4

TRIM6-TRIM34, TRIM6-TRIM34 readthrough, humanhuman

Predictions only

Length 842 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-TRIM34B2RNG4 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC32.12■■■□□ 2.73
TRIM6-TRIM34B2RNG4 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
TRIM6-TRIM34B2RNG4 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC32.11■■■□□ 2.73
TRIM6-TRIM34B2RNG4 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC32.1■■■□□ 2.73
TRIM6-TRIM34B2RNG4 CHML-205ENST00000638160 705 ntTSL 3 BASIC32.09■■■□□ 2.73
TRIM6-TRIM34B2RNG4 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
TRIM6-TRIM34B2RNG4 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC32.08■■■□□ 2.73
TRIM6-TRIM34B2RNG4 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
TRIM6-TRIM34B2RNG4 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
TRIM6-TRIM34B2RNG4 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC32.08■■■□□ 2.73
TRIM6-TRIM34B2RNG4 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.73
TRIM6-TRIM34B2RNG4 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC32.07■■■□□ 2.72
TRIM6-TRIM34B2RNG4 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC32.07■■■□□ 2.72
TRIM6-TRIM34B2RNG4 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
TRIM6-TRIM34B2RNG4 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC32.07■■■□□ 2.72
TRIM6-TRIM34B2RNG4 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
TRIM6-TRIM34B2RNG4 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
TRIM6-TRIM34B2RNG4 HNRNPLP2-201ENST00000568980 1570 ntBASIC32.06■■■□□ 2.72
TRIM6-TRIM34B2RNG4 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC32.05■■■□□ 2.72
TRIM6-TRIM34B2RNG4 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC32.05■■■□□ 2.72
TRIM6-TRIM34B2RNG4 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
TRIM6-TRIM34B2RNG4 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC32.05■■■□□ 2.72
TRIM6-TRIM34B2RNG4 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
TRIM6-TRIM34B2RNG4 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC32.03■■■□□ 2.72
TRIM6-TRIM34B2RNG4 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
TRIM6-TRIM34B2RNG4 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
TRIM6-TRIM34B2RNG4 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC32.02■■■□□ 2.72
TRIM6-TRIM34B2RNG4 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC32.01■■■□□ 2.72
TRIM6-TRIM34B2RNG4 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC32.01■■■□□ 2.71
TRIM6-TRIM34B2RNG4 AC005559.1-201ENST00000589661 871 ntBASIC32■■■□□ 2.71
TRIM6-TRIM34B2RNG4 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC31.99■■■□□ 2.71
TRIM6-TRIM34B2RNG4 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC31.99■■■□□ 2.71
TRIM6-TRIM34B2RNG4 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
TRIM6-TRIM34B2RNG4 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC31.98■■■□□ 2.71
TRIM6-TRIM34B2RNG4 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
TRIM6-TRIM34B2RNG4 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
TRIM6-TRIM34B2RNG4 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC31.97■■■□□ 2.71
TRIM6-TRIM34B2RNG4 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC31.97■■■□□ 2.71
TRIM6-TRIM34B2RNG4 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
TRIM6-TRIM34B2RNG4 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
TRIM6-TRIM34B2RNG4 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC31.96■■■□□ 2.71
TRIM6-TRIM34B2RNG4 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
TRIM6-TRIM34B2RNG4 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
TRIM6-TRIM34B2RNG4 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC31.95■■■□□ 2.71
TRIM6-TRIM34B2RNG4 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC31.95■■■□□ 2.71
TRIM6-TRIM34B2RNG4 RPS2-209ENST00000529806 993 ntTSL 3 BASIC31.95■■■□□ 2.71
TRIM6-TRIM34B2RNG4 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
TRIM6-TRIM34B2RNG4 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
TRIM6-TRIM34B2RNG4 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
TRIM6-TRIM34B2RNG4 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC31.93■■■□□ 2.7
TRIM6-TRIM34B2RNG4 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC31.93■■■□□ 2.7
TRIM6-TRIM34B2RNG4 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
TRIM6-TRIM34B2RNG4 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC31.91■■■□□ 2.7
TRIM6-TRIM34B2RNG4 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC31.9■■■□□ 2.7
TRIM6-TRIM34B2RNG4 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC31.9■■■□□ 2.7
TRIM6-TRIM34B2RNG4 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC31.9■■■□□ 2.7
TRIM6-TRIM34B2RNG4 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
TRIM6-TRIM34B2RNG4 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
TRIM6-TRIM34B2RNG4 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
TRIM6-TRIM34B2RNG4 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
TRIM6-TRIM34B2RNG4 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.69
TRIM6-TRIM34B2RNG4 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC31.88■■■□□ 2.69
TRIM6-TRIM34B2RNG4 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
TRIM6-TRIM34B2RNG4 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
TRIM6-TRIM34B2RNG4 DUX4L28-201ENST00000623687 678 ntBASIC31.88■■■□□ 2.69
TRIM6-TRIM34B2RNG4 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
TRIM6-TRIM34B2RNG4 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
TRIM6-TRIM34B2RNG4 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC31.87■■■□□ 2.69
TRIM6-TRIM34B2RNG4 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC31.86■■■□□ 2.69
TRIM6-TRIM34B2RNG4 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
TRIM6-TRIM34B2RNG4 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
TRIM6-TRIM34B2RNG4 SHF-206ENST00000560471 2499 ntTSL 5 BASIC31.85■■■□□ 2.69
TRIM6-TRIM34B2RNG4 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC31.85■■■□□ 2.69
TRIM6-TRIM34B2RNG4 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC31.84■■■□□ 2.69
TRIM6-TRIM34B2RNG4 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC31.84■■■□□ 2.69
TRIM6-TRIM34B2RNG4 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
TRIM6-TRIM34B2RNG4 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC31.84■■■□□ 2.69
TRIM6-TRIM34B2RNG4 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC31.83■■■□□ 2.69
TRIM6-TRIM34B2RNG4 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC31.83■■■□□ 2.69
TRIM6-TRIM34B2RNG4 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC31.83■■■□□ 2.69
TRIM6-TRIM34B2RNG4 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC31.82■■■□□ 2.68
TRIM6-TRIM34B2RNG4 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC31.81■■■□□ 2.68
TRIM6-TRIM34B2RNG4 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC31.81■■■□□ 2.68
TRIM6-TRIM34B2RNG4 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC31.81■■■□□ 2.68
TRIM6-TRIM34B2RNG4 MIR3665-201ENST00000578708 105 ntBASIC31.81■■■□□ 2.68
TRIM6-TRIM34B2RNG4 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC31.81■■■□□ 2.68
TRIM6-TRIM34B2RNG4 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
TRIM6-TRIM34B2RNG4 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
TRIM6-TRIM34B2RNG4 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC31.8■■■□□ 2.68
TRIM6-TRIM34B2RNG4 AL139393.2-201ENST00000608721 2025 ntBASIC31.8■■■□□ 2.68
TRIM6-TRIM34B2RNG4 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC31.79■■■□□ 2.68
TRIM6-TRIM34B2RNG4 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC31.79■■■□□ 2.68
TRIM6-TRIM34B2RNG4 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
TRIM6-TRIM34B2RNG4 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
TRIM6-TRIM34B2RNG4 AP006261.1-201ENST00000584783 668 ntBASIC31.78■■■□□ 2.68
TRIM6-TRIM34B2RNG4 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC31.78■■■□□ 2.68
TRIM6-TRIM34B2RNG4 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
TRIM6-TRIM34B2RNG4 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC31.77■■■□□ 2.68
TRIM6-TRIM34B2RNG4 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC31.76■■■□□ 2.67
TRIM6-TRIM34B2RNG4 NRG1-221ENST00000614767 762 ntTSL 5 BASIC31.76■■■□□ 2.67
Retrieved 100 of 98,524 protein–RNA pairs in 126.4 ms