Protein–RNA interactions for Protein: A0A183

LCE6A, Late cornified envelope protein 6A, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE6AA0A183 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LCE6AA0A183 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
LCE6AA0A183 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LCE6AA0A183 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
LCE6AA0A183 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LCE6AA0A183 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LCE6AA0A183 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC18.52■□□□□ 0.56
LCE6AA0A183 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LCE6AA0A183 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LCE6AA0A183 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LCE6AA0A183 CEP120-209ENST00000515110 606 ntTSL 3 BASIC18.5■□□□□ 0.55
LCE6AA0A183 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LCE6AA0A183 CHML-204ENST00000638121 920 ntTSL 2 BASIC18.5■□□□□ 0.55
LCE6AA0A183 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC18.5■□□□□ 0.55
LCE6AA0A183 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LCE6AA0A183 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC18.49■□□□□ 0.55
LCE6AA0A183 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC18.48■□□□□ 0.55
LCE6AA0A183 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LCE6AA0A183 AL033527.3-201ENST00000566366 1196 ntBASIC18.48■□□□□ 0.55
LCE6AA0A183 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LCE6AA0A183 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
LCE6AA0A183 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
LCE6AA0A183 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
LCE6AA0A183 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LCE6AA0A183 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
LCE6AA0A183 AC008813.1-201ENST00000536597 885 ntBASIC18.46■□□□□ 0.55
LCE6AA0A183 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC18.45■□□□□ 0.54
LCE6AA0A183 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC18.45■□□□□ 0.54
LCE6AA0A183 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LCE6AA0A183 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LCE6AA0A183 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
LCE6AA0A183 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
LCE6AA0A183 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
LCE6AA0A183 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LCE6AA0A183 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
LCE6AA0A183 AC019069.1-201ENST00000610008 1333 ntBASIC18.42■□□□□ 0.54
LCE6AA0A183 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LCE6AA0A183 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
LCE6AA0A183 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
LCE6AA0A183 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC18.4■□□□□ 0.54
LCE6AA0A183 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC18.4■□□□□ 0.54
LCE6AA0A183 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC18.4■□□□□ 0.54
LCE6AA0A183 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LCE6AA0A183 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LCE6AA0A183 HES4-202ENST00000428771 1040 ntTSL 2 BASIC18.39■□□□□ 0.53
LCE6AA0A183 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LCE6AA0A183 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LCE6AA0A183 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
LCE6AA0A183 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
LCE6AA0A183 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LCE6AA0A183 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LCE6AA0A183 CHST11-202ENST00000546689 756 ntTSL 2 BASIC18.37■□□□□ 0.53
LCE6AA0A183 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
LCE6AA0A183 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC18.36■□□□□ 0.53
LCE6AA0A183 AC022413.1-201ENST00000624602 984 ntBASIC18.36■□□□□ 0.53
LCE6AA0A183 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LCE6AA0A183 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC18.35■□□□□ 0.53
LCE6AA0A183 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LCE6AA0A183 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC18.34■□□□□ 0.53
LCE6AA0A183 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LCE6AA0A183 RARRES2P1-201ENST00000474487 481 ntBASIC18.33■□□□□ 0.52
LCE6AA0A183 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
LCE6AA0A183 EI24-212ENST00000615917 1407 ntTSL 2 BASIC18.32■□□□□ 0.52
LCE6AA0A183 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LCE6AA0A183 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC18.32■□□□□ 0.52
LCE6AA0A183 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LCE6AA0A183 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LCE6AA0A183 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LCE6AA0A183 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
LCE6AA0A183 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LCE6AA0A183 GFER-205ENST00000569451 517 ntTSL 5 BASIC18.3■□□□□ 0.52
LCE6AA0A183 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LCE6AA0A183 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LCE6AA0A183 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LCE6AA0A183 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
LCE6AA0A183 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LCE6AA0A183 TSPY13P-201ENST00000338964 914 ntBASIC18.28■□□□□ 0.52
LCE6AA0A183 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LCE6AA0A183 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC18.28■□□□□ 0.52
LCE6AA0A183 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC18.28■□□□□ 0.52
LCE6AA0A183 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
LCE6AA0A183 AL592295.1-201ENST00000400984 884 ntBASIC18.26■□□□□ 0.51
LCE6AA0A183 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC18.26■□□□□ 0.51
LCE6AA0A183 U85056.1-201ENST00000616429 682 ntBASIC18.26■□□□□ 0.51
LCE6AA0A183 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC18.26■□□□□ 0.51
LCE6AA0A183 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LCE6AA0A183 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LCE6AA0A183 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LCE6AA0A183 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC18.25■□□□□ 0.51
LCE6AA0A183 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC18.24■□□□□ 0.51
LCE6AA0A183 HYI-213ENST00000583037 1322 ntTSL 5 BASIC18.23■□□□□ 0.51
LCE6AA0A183 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LCE6AA0A183 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LCE6AA0A183 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC18.23■□□□□ 0.51
LCE6AA0A183 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC18.23■□□□□ 0.51
LCE6AA0A183 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LCE6AA0A183 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LCE6AA0A183 MTURN-203ENST00000409688 843 ntTSL 2 BASIC18.22■□□□□ 0.51
LCE6AA0A183 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LCE6AA0A183 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms