Protein–RNA interactions for Protein: A0A0K0K1B3

TRBV30, T-cell receptor beta variable 30 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV30A0A0K0K1B3 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRBV30A0A0K0K1B3 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRBV30A0A0K0K1B3 ST7-AS1-201ENST00000456775 1889 ntBASIC17.73■□□□□ 0.43
TRBV30A0A0K0K1B3 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRBV30A0A0K0K1B3 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRBV30A0A0K0K1B3 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
TRBV30A0A0K0K1B3 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
TRBV30A0A0K0K1B3 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
TRBV30A0A0K0K1B3 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
TRBV30A0A0K0K1B3 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC17.71■□□□□ 0.43
TRBV30A0A0K0K1B3 AP002365.1-201ENST00000603448 772 ntBASIC17.71■□□□□ 0.43
TRBV30A0A0K0K1B3 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
TRBV30A0A0K0K1B3 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC17.7■□□□□ 0.42
TRBV30A0A0K0K1B3 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC17.7■□□□□ 0.42
TRBV30A0A0K0K1B3 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRBV30A0A0K0K1B3 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV30A0A0K0K1B3 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
TRBV30A0A0K0K1B3 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC17.69■□□□□ 0.42
TRBV30A0A0K0K1B3 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRBV30A0A0K0K1B3 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV30A0A0K0K1B3 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV30A0A0K0K1B3 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC17.68■□□□□ 0.42
TRBV30A0A0K0K1B3 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRBV30A0A0K0K1B3 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC17.68■□□□□ 0.42
TRBV30A0A0K0K1B3 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
TRBV30A0A0K0K1B3 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
TRBV30A0A0K0K1B3 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRBV30A0A0K0K1B3 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV30A0A0K0K1B3 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV30A0A0K0K1B3 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC17.66■□□□□ 0.42
TRBV30A0A0K0K1B3 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
TRBV30A0A0K0K1B3 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV30A0A0K0K1B3 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV30A0A0K0K1B3 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
TRBV30A0A0K0K1B3 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV30A0A0K0K1B3 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC17.64■□□□□ 0.41
TRBV30A0A0K0K1B3 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC17.64■□□□□ 0.41
TRBV30A0A0K0K1B3 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRBV30A0A0K0K1B3 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.41
TRBV30A0A0K0K1B3 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
TRBV30A0A0K0K1B3 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC17.64■□□□□ 0.41
TRBV30A0A0K0K1B3 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRBV30A0A0K0K1B3 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRBV30A0A0K0K1B3 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRBV30A0A0K0K1B3 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRBV30A0A0K0K1B3 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
TRBV30A0A0K0K1B3 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC17.62■□□□□ 0.41
TRBV30A0A0K0K1B3 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRBV30A0A0K0K1B3 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRBV30A0A0K0K1B3 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
TRBV30A0A0K0K1B3 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
TRBV30A0A0K0K1B3 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRBV30A0A0K0K1B3 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
TRBV30A0A0K0K1B3 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
TRBV30A0A0K0K1B3 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRBV30A0A0K0K1B3 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRBV30A0A0K0K1B3 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRBV30A0A0K0K1B3 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRBV30A0A0K0K1B3 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC17.59■□□□□ 0.41
TRBV30A0A0K0K1B3 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRBV30A0A0K0K1B3 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC17.58■□□□□ 0.41
TRBV30A0A0K0K1B3 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.41
TRBV30A0A0K0K1B3 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRBV30A0A0K0K1B3 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV30A0A0K0K1B3 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV30A0A0K0K1B3 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
TRBV30A0A0K0K1B3 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV30A0A0K0K1B3 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV30A0A0K0K1B3 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC17.57■□□□□ 0.4
TRBV30A0A0K0K1B3 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV30A0A0K0K1B3 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRBV30A0A0K0K1B3 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRBV30A0A0K0K1B3 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRBV30A0A0K0K1B3 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRBV30A0A0K0K1B3 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRBV30A0A0K0K1B3 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRBV30A0A0K0K1B3 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRBV30A0A0K0K1B3 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRBV30A0A0K0K1B3 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
TRBV30A0A0K0K1B3 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRBV30A0A0K0K1B3 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TRBV30A0A0K0K1B3 SNAI3-AS1-204ENST00000567997 2048 ntBASIC17.55■□□□□ 0.4
TRBV30A0A0K0K1B3 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRBV30A0A0K0K1B3 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
TRBV30A0A0K0K1B3 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRBV30A0A0K0K1B3 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
TRBV30A0A0K0K1B3 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRBV30A0A0K0K1B3 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRBV30A0A0K0K1B3 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRBV30A0A0K0K1B3 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
TRBV30A0A0K0K1B3 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRBV30A0A0K0K1B3 PKM-204ENST00000449901 2526 ntTSL 2 BASIC17.53■□□□□ 0.4
TRBV30A0A0K0K1B3 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRBV30A0A0K0K1B3 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRBV30A0A0K0K1B3 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRBV30A0A0K0K1B3 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRBV30A0A0K0K1B3 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
TRBV30A0A0K0K1B3 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRBV30A0A0K0K1B3 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRBV30A0A0K0K1B3 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms