Protein–RNA interactions for Protein: A0A0C4DH28

TRGV4, T-cell receptor gamma variable 4 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV4A0A0C4DH28 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRGV4A0A0C4DH28 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRGV4A0A0C4DH28 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRGV4A0A0C4DH28 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRGV4A0A0C4DH28 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
TRGV4A0A0C4DH28 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC18.69■□□□□ 0.58
TRGV4A0A0C4DH28 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRGV4A0A0C4DH28 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRGV4A0A0C4DH28 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRGV4A0A0C4DH28 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRGV4A0A0C4DH28 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRGV4A0A0C4DH28 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRGV4A0A0C4DH28 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TRGV4A0A0C4DH28 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRGV4A0A0C4DH28 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
TRGV4A0A0C4DH28 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRGV4A0A0C4DH28 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
TRGV4A0A0C4DH28 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRGV4A0A0C4DH28 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRGV4A0A0C4DH28 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRGV4A0A0C4DH28 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRGV4A0A0C4DH28 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRGV4A0A0C4DH28 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRGV4A0A0C4DH28 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRGV4A0A0C4DH28 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRGV4A0A0C4DH28 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC18.64■□□□□ 0.57
TRGV4A0A0C4DH28 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRGV4A0A0C4DH28 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
TRGV4A0A0C4DH28 ABCB10P3-201ENST00000561950 2166 ntBASIC18.64■□□□□ 0.57
TRGV4A0A0C4DH28 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC18.63■□□□□ 0.57
TRGV4A0A0C4DH28 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRGV4A0A0C4DH28 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRGV4A0A0C4DH28 AC010864.1-201ENST00000609407 1511 ntBASIC18.63■□□□□ 0.57
TRGV4A0A0C4DH28 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
TRGV4A0A0C4DH28 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC18.62■□□□□ 0.57
TRGV4A0A0C4DH28 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRGV4A0A0C4DH28 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC18.62■□□□□ 0.57
TRGV4A0A0C4DH28 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRGV4A0A0C4DH28 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
TRGV4A0A0C4DH28 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC18.62■□□□□ 0.57
TRGV4A0A0C4DH28 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRGV4A0A0C4DH28 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC18.61■□□□□ 0.57
TRGV4A0A0C4DH28 MIR762-201ENST00000390236 83 ntBASIC18.61■□□□□ 0.57
TRGV4A0A0C4DH28 CHML-205ENST00000638160 705 ntTSL 3 BASIC18.61■□□□□ 0.57
TRGV4A0A0C4DH28 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
TRGV4A0A0C4DH28 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRGV4A0A0C4DH28 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC18.6■□□□□ 0.57
TRGV4A0A0C4DH28 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRGV4A0A0C4DH28 RPS2-209ENST00000529806 993 ntTSL 3 BASIC18.6■□□□□ 0.57
TRGV4A0A0C4DH28 SUZ12P1-203ENST00000578195 985 ntBASIC18.6■□□□□ 0.57
TRGV4A0A0C4DH28 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRGV4A0A0C4DH28 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
TRGV4A0A0C4DH28 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRGV4A0A0C4DH28 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRGV4A0A0C4DH28 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRGV4A0A0C4DH28 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
TRGV4A0A0C4DH28 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TRGV4A0A0C4DH28 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRGV4A0A0C4DH28 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRGV4A0A0C4DH28 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.56
TRGV4A0A0C4DH28 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
TRGV4A0A0C4DH28 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRGV4A0A0C4DH28 HNRNPLP2-201ENST00000568980 1570 ntBASIC18.57■□□□□ 0.56
TRGV4A0A0C4DH28 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRGV4A0A0C4DH28 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRGV4A0A0C4DH28 AC005559.1-201ENST00000589661 871 ntBASIC18.56■□□□□ 0.56
TRGV4A0A0C4DH28 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC18.56■□□□□ 0.56
TRGV4A0A0C4DH28 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
TRGV4A0A0C4DH28 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
TRGV4A0A0C4DH28 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRGV4A0A0C4DH28 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
TRGV4A0A0C4DH28 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRGV4A0A0C4DH28 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC18.55■□□□□ 0.56
TRGV4A0A0C4DH28 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRGV4A0A0C4DH28 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRGV4A0A0C4DH28 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRGV4A0A0C4DH28 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRGV4A0A0C4DH28 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRGV4A0A0C4DH28 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRGV4A0A0C4DH28 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRGV4A0A0C4DH28 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRGV4A0A0C4DH28 AC139426.1-201ENST00000568218 2529 ntBASIC18.53■□□□□ 0.56
TRGV4A0A0C4DH28 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRGV4A0A0C4DH28 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC18.53■□□□□ 0.56
TRGV4A0A0C4DH28 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
TRGV4A0A0C4DH28 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRGV4A0A0C4DH28 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRGV4A0A0C4DH28 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TRGV4A0A0C4DH28 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
TRGV4A0A0C4DH28 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRGV4A0A0C4DH28 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRGV4A0A0C4DH28 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
TRGV4A0A0C4DH28 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRGV4A0A0C4DH28 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRGV4A0A0C4DH28 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRGV4A0A0C4DH28 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRGV4A0A0C4DH28 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRGV4A0A0C4DH28 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRGV4A0A0C4DH28 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC18.5■□□□□ 0.55
TRGV4A0A0C4DH28 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 862.7 ms