Protein–RNA interactions for Protein: A0A0B4J273

TRAV34, T-cell receptor alpha variable 34 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV34A0A0B4J273 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC20.15■□□□□ 0.82
TRAV34A0A0B4J273 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TRAV34A0A0B4J273 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TRAV34A0A0B4J273 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRAV34A0A0B4J273 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
TRAV34A0A0B4J273 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRAV34A0A0B4J273 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRAV34A0A0B4J273 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
TRAV34A0A0B4J273 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRAV34A0A0B4J273 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRAV34A0A0B4J273 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRAV34A0A0B4J273 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRAV34A0A0B4J273 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
TRAV34A0A0B4J273 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRAV34A0A0B4J273 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRAV34A0A0B4J273 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRAV34A0A0B4J273 AC006077.2-201ENST00000623591 457 ntBASIC20.1■□□□□ 0.81
TRAV34A0A0B4J273 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
TRAV34A0A0B4J273 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
TRAV34A0A0B4J273 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TRAV34A0A0B4J273 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRAV34A0A0B4J273 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRAV34A0A0B4J273 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC20.08■□□□□ 0.81
TRAV34A0A0B4J273 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TRAV34A0A0B4J273 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRAV34A0A0B4J273 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC20.06■□□□□ 0.8
TRAV34A0A0B4J273 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC20.05■□□□□ 0.8
TRAV34A0A0B4J273 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRAV34A0A0B4J273 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRAV34A0A0B4J273 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TRAV34A0A0B4J273 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TRAV34A0A0B4J273 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
TRAV34A0A0B4J273 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRAV34A0A0B4J273 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
TRAV34A0A0B4J273 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRAV34A0A0B4J273 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRAV34A0A0B4J273 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRAV34A0A0B4J273 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRAV34A0A0B4J273 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRAV34A0A0B4J273 AL139393.2-201ENST00000608721 2025 ntBASIC20.02■□□□□ 0.8
TRAV34A0A0B4J273 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRAV34A0A0B4J273 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRAV34A0A0B4J273 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRAV34A0A0B4J273 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRAV34A0A0B4J273 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
TRAV34A0A0B4J273 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
TRAV34A0A0B4J273 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRAV34A0A0B4J273 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
TRAV34A0A0B4J273 DRD5P2-201ENST00000421395 2012 ntBASIC20■□□□□ 0.79
TRAV34A0A0B4J273 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRAV34A0A0B4J273 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
TRAV34A0A0B4J273 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC19.99■□□□□ 0.79
TRAV34A0A0B4J273 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC19.99■□□□□ 0.79
TRAV34A0A0B4J273 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRAV34A0A0B4J273 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC19.98■□□□□ 0.79
TRAV34A0A0B4J273 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC19.97■□□□□ 0.79
TRAV34A0A0B4J273 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRAV34A0A0B4J273 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRAV34A0A0B4J273 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRAV34A0A0B4J273 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC19.97■□□□□ 0.79
TRAV34A0A0B4J273 AL121749.1-202ENST00000609313 2153 ntBASIC19.96■□□□□ 0.79
TRAV34A0A0B4J273 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRAV34A0A0B4J273 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRAV34A0A0B4J273 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRAV34A0A0B4J273 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRAV34A0A0B4J273 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRAV34A0A0B4J273 DYNLL1-208ENST00000550178 581 ntBASIC19.95■□□□□ 0.78
TRAV34A0A0B4J273 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TRAV34A0A0B4J273 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRAV34A0A0B4J273 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRAV34A0A0B4J273 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TRAV34A0A0B4J273 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRAV34A0A0B4J273 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRAV34A0A0B4J273 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TRAV34A0A0B4J273 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC19.94■□□□□ 0.78
TRAV34A0A0B4J273 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
TRAV34A0A0B4J273 EBPL-203ENST00000378270 579 ntTSL 2 BASIC19.93■□□□□ 0.78
TRAV34A0A0B4J273 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
TRAV34A0A0B4J273 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV34A0A0B4J273 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRAV34A0A0B4J273 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TRAV34A0A0B4J273 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
TRAV34A0A0B4J273 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAV34A0A0B4J273 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAV34A0A0B4J273 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAV34A0A0B4J273 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRAV34A0A0B4J273 ZNRF2P1-201ENST00000441407 443 ntBASIC19.89■□□□□ 0.77
TRAV34A0A0B4J273 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRAV34A0A0B4J273 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRAV34A0A0B4J273 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
TRAV34A0A0B4J273 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRAV34A0A0B4J273 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
TRAV34A0A0B4J273 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRAV34A0A0B4J273 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TRAV34A0A0B4J273 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRAV34A0A0B4J273 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRAV34A0A0B4J273 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRAV34A0A0B4J273 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRAV34A0A0B4J273 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRAV34A0A0B4J273 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 13 ms