Protein–RNA interactions for Protein: Q9HD34

LYRM4, LYR motif-containing protein 4, humanhuman

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM4Q9HD34 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
LYRM4Q9HD34 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
LYRM4Q9HD34 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC25.25■■□□□ 1.63
LYRM4Q9HD34 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
LYRM4Q9HD34 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
LYRM4Q9HD34 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
LYRM4Q9HD34 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC25.22■■□□□ 1.63
LYRM4Q9HD34 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
LYRM4Q9HD34 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
LYRM4Q9HD34 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC25.21■■□□□ 1.63
LYRM4Q9HD34 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
LYRM4Q9HD34 CHML-205ENST00000638160 705 ntTSL 3 BASIC25.2■■□□□ 1.62
LYRM4Q9HD34 HNRNPLP2-201ENST00000568980 1570 ntBASIC25.19■■□□□ 1.62
LYRM4Q9HD34 MIR762-201ENST00000390236 83 ntBASIC25.19■■□□□ 1.62
LYRM4Q9HD34 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC25.19■■□□□ 1.62
LYRM4Q9HD34 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
LYRM4Q9HD34 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
LYRM4Q9HD34 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC25.18■■□□□ 1.62
LYRM4Q9HD34 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
LYRM4Q9HD34 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
LYRM4Q9HD34 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC25.16■■□□□ 1.62
LYRM4Q9HD34 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC25.16■■□□□ 1.62
LYRM4Q9HD34 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
LYRM4Q9HD34 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC25.15■■□□□ 1.62
LYRM4Q9HD34 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
LYRM4Q9HD34 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
LYRM4Q9HD34 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC25.14■■□□□ 1.62
LYRM4Q9HD34 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC25.14■■□□□ 1.62
LYRM4Q9HD34 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
LYRM4Q9HD34 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
LYRM4Q9HD34 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
LYRM4Q9HD34 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
LYRM4Q9HD34 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC25.12■■□□□ 1.61
LYRM4Q9HD34 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC25.12■■□□□ 1.61
LYRM4Q9HD34 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
LYRM4Q9HD34 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
LYRM4Q9HD34 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
LYRM4Q9HD34 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
LYRM4Q9HD34 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC25.1■■□□□ 1.61
LYRM4Q9HD34 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
LYRM4Q9HD34 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC25.09■■□□□ 1.61
LYRM4Q9HD34 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
LYRM4Q9HD34 AC005559.1-201ENST00000589661 871 ntBASIC25.08■■□□□ 1.61
LYRM4Q9HD34 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.61
LYRM4Q9HD34 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC25.08■■□□□ 1.61
LYRM4Q9HD34 AP006261.1-201ENST00000584783 668 ntBASIC25.07■■□□□ 1.6
LYRM4Q9HD34 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC25.07■■□□□ 1.6
LYRM4Q9HD34 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
LYRM4Q9HD34 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
LYRM4Q9HD34 AL135925.1-201ENST00000605920 1701 ntBASIC25.05■■□□□ 1.6
LYRM4Q9HD34 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC25.04■■□□□ 1.6
LYRM4Q9HD34 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC25.03■■□□□ 1.6
LYRM4Q9HD34 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
LYRM4Q9HD34 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
LYRM4Q9HD34 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC25.02■■□□□ 1.6
LYRM4Q9HD34 MIR3665-201ENST00000578708 105 ntBASIC25.02■■□□□ 1.6
LYRM4Q9HD34 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
LYRM4Q9HD34 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
LYRM4Q9HD34 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
LYRM4Q9HD34 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC25.01■■□□□ 1.59
LYRM4Q9HD34 RPS2-209ENST00000529806 993 ntTSL 3 BASIC25■■□□□ 1.59
LYRM4Q9HD34 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC25■■□□□ 1.59
LYRM4Q9HD34 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC25■■□□□ 1.59
LYRM4Q9HD34 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC24.98■■□□□ 1.59
LYRM4Q9HD34 DUX4L28-201ENST00000623687 678 ntBASIC24.98■■□□□ 1.59
LYRM4Q9HD34 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC24.97■■□□□ 1.59
LYRM4Q9HD34 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC24.97■■□□□ 1.59
LYRM4Q9HD34 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC24.97■■□□□ 1.59
LYRM4Q9HD34 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
LYRM4Q9HD34 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC24.97■■□□□ 1.59
LYRM4Q9HD34 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC24.97■■□□□ 1.59
LYRM4Q9HD34 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
LYRM4Q9HD34 ST7-AS1-201ENST00000456775 1889 ntBASIC24.96■■□□□ 1.59
LYRM4Q9HD34 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
LYRM4Q9HD34 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC24.95■■□□□ 1.58
LYRM4Q9HD34 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
LYRM4Q9HD34 NRG1-221ENST00000614767 762 ntTSL 5 BASIC24.95■■□□□ 1.58
LYRM4Q9HD34 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
LYRM4Q9HD34 AC010864.1-201ENST00000609407 1511 ntBASIC24.95■■□□□ 1.58
LYRM4Q9HD34 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
LYRM4Q9HD34 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
LYRM4Q9HD34 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
LYRM4Q9HD34 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC24.93■■□□□ 1.58
LYRM4Q9HD34 AL162393.1-201ENST00000437852 946 ntBASIC24.93■■□□□ 1.58
LYRM4Q9HD34 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC24.93■■□□□ 1.58
LYRM4Q9HD34 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
LYRM4Q9HD34 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
LYRM4Q9HD34 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
LYRM4Q9HD34 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC24.91■■□□□ 1.58
LYRM4Q9HD34 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC24.9■■□□□ 1.58
LYRM4Q9HD34 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
LYRM4Q9HD34 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
LYRM4Q9HD34 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC24.89■■□□□ 1.57
LYRM4Q9HD34 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
LYRM4Q9HD34 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
LYRM4Q9HD34 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC24.88■■□□□ 1.57
LYRM4Q9HD34 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC24.88■■□□□ 1.57
LYRM4Q9HD34 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC24.88■■□□□ 1.57
LYRM4Q9HD34 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC24.88■■□□□ 1.57
LYRM4Q9HD34 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms