Protein–RNA interactions for Protein: Q9H492

MAP1LC3A, Microtubule-associated proteins 1A/1B light chain 3A, humanhuman

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3AQ9H492 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MAP1LC3AQ9H492 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
MAP1LC3AQ9H492 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
MAP1LC3AQ9H492 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
MAP1LC3AQ9H492 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC19.43■□□□□ 0.7
MAP1LC3AQ9H492 INO80B-203ENST00000409917 796 ntTSL 2 BASIC19.42■□□□□ 0.7
MAP1LC3AQ9H492 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC19.42■□□□□ 0.7
MAP1LC3AQ9H492 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MAP1LC3AQ9H492 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
MAP1LC3AQ9H492 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC19.41■□□□□ 0.7
MAP1LC3AQ9H492 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
MAP1LC3AQ9H492 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
MAP1LC3AQ9H492 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
MAP1LC3AQ9H492 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
MAP1LC3AQ9H492 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
MAP1LC3AQ9H492 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MAP1LC3AQ9H492 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
MAP1LC3AQ9H492 AC015813.7-201ENST00000623294 581 ntBASIC19.39■□□□□ 0.69
MAP1LC3AQ9H492 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
MAP1LC3AQ9H492 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MAP1LC3AQ9H492 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
MAP1LC3AQ9H492 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
MAP1LC3AQ9H492 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC19.38■□□□□ 0.69
MAP1LC3AQ9H492 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MAP1LC3AQ9H492 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
MAP1LC3AQ9H492 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC19.37■□□□□ 0.69
MAP1LC3AQ9H492 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MAP1LC3AQ9H492 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MAP1LC3AQ9H492 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
MAP1LC3AQ9H492 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
MAP1LC3AQ9H492 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MAP1LC3AQ9H492 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MAP1LC3AQ9H492 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MAP1LC3AQ9H492 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MAP1LC3AQ9H492 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MAP1LC3AQ9H492 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
MAP1LC3AQ9H492 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
MAP1LC3AQ9H492 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC19.33■□□□□ 0.69
MAP1LC3AQ9H492 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
MAP1LC3AQ9H492 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
MAP1LC3AQ9H492 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
MAP1LC3AQ9H492 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
MAP1LC3AQ9H492 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
MAP1LC3AQ9H492 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MAP1LC3AQ9H492 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MAP1LC3AQ9H492 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
MAP1LC3AQ9H492 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
MAP1LC3AQ9H492 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MAP1LC3AQ9H492 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MAP1LC3AQ9H492 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
MAP1LC3AQ9H492 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MAP1LC3AQ9H492 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
MAP1LC3AQ9H492 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
MAP1LC3AQ9H492 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
MAP1LC3AQ9H492 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
MAP1LC3AQ9H492 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MAP1LC3AQ9H492 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
MAP1LC3AQ9H492 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
MAP1LC3AQ9H492 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MAP1LC3AQ9H492 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC19.23■□□□□ 0.67
MAP1LC3AQ9H492 CREM-210ENST00000374721 2020 ntTSL 5 BASIC19.23■□□□□ 0.67
MAP1LC3AQ9H492 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MAP1LC3AQ9H492 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC19.23■□□□□ 0.67
MAP1LC3AQ9H492 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MAP1LC3AQ9H492 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MAP1LC3AQ9H492 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
MAP1LC3AQ9H492 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC19.22■□□□□ 0.67
MAP1LC3AQ9H492 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MAP1LC3AQ9H492 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
MAP1LC3AQ9H492 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MAP1LC3AQ9H492 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MAP1LC3AQ9H492 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
MAP1LC3AQ9H492 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
MAP1LC3AQ9H492 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MAP1LC3AQ9H492 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MAP1LC3AQ9H492 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
MAP1LC3AQ9H492 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
MAP1LC3AQ9H492 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
MAP1LC3AQ9H492 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MAP1LC3AQ9H492 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MAP1LC3AQ9H492 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
MAP1LC3AQ9H492 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC19.18■□□□□ 0.66
MAP1LC3AQ9H492 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
MAP1LC3AQ9H492 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MAP1LC3AQ9H492 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MAP1LC3AQ9H492 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MAP1LC3AQ9H492 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MAP1LC3AQ9H492 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MAP1LC3AQ9H492 MVK-208ENST00000539696 608 ntTSL 5 BASIC19.16■□□□□ 0.66
MAP1LC3AQ9H492 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC19.16■□□□□ 0.66
MAP1LC3AQ9H492 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC19.16■□□□□ 0.66
MAP1LC3AQ9H492 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
MAP1LC3AQ9H492 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
MAP1LC3AQ9H492 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
MAP1LC3AQ9H492 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MAP1LC3AQ9H492 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MAP1LC3AQ9H492 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
MAP1LC3AQ9H492 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MAP1LC3AQ9H492 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
MAP1LC3AQ9H492 AL135925.1-201ENST00000605920 1701 ntBASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms