Protein–RNA interactions for Protein: Q9BY65

NPCDR1, Nasopharyngeal carcinoma down-regulated gene protein 1, humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPCDR1Q9BY65 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NPCDR1Q9BY65 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC21.12■□□□□ 0.97
NPCDR1Q9BY65 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NPCDR1Q9BY65 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NPCDR1Q9BY65 AC142086.6-201ENST00000621154 1765 ntBASIC21.11■□□□□ 0.97
NPCDR1Q9BY65 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
NPCDR1Q9BY65 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NPCDR1Q9BY65 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NPCDR1Q9BY65 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
NPCDR1Q9BY65 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NPCDR1Q9BY65 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC21.1■□□□□ 0.97
NPCDR1Q9BY65 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NPCDR1Q9BY65 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NPCDR1Q9BY65 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NPCDR1Q9BY65 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NPCDR1Q9BY65 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
NPCDR1Q9BY65 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NPCDR1Q9BY65 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC21.07■□□□□ 0.96
NPCDR1Q9BY65 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
NPCDR1Q9BY65 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NPCDR1Q9BY65 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC21.05■□□□□ 0.96
NPCDR1Q9BY65 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC21.05■□□□□ 0.96
NPCDR1Q9BY65 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
NPCDR1Q9BY65 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC21.04■□□□□ 0.96
NPCDR1Q9BY65 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC21.04■□□□□ 0.96
NPCDR1Q9BY65 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NPCDR1Q9BY65 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NPCDR1Q9BY65 AL135925.1-201ENST00000605920 1701 ntBASIC21.04■□□□□ 0.96
NPCDR1Q9BY65 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NPCDR1Q9BY65 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NPCDR1Q9BY65 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NPCDR1Q9BY65 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NPCDR1Q9BY65 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NPCDR1Q9BY65 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
NPCDR1Q9BY65 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
NPCDR1Q9BY65 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
NPCDR1Q9BY65 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NPCDR1Q9BY65 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NPCDR1Q9BY65 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
NPCDR1Q9BY65 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NPCDR1Q9BY65 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NPCDR1Q9BY65 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
NPCDR1Q9BY65 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC21■□□□□ 0.95
NPCDR1Q9BY65 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC20.99■□□□□ 0.95
NPCDR1Q9BY65 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NPCDR1Q9BY65 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC20.97■□□□□ 0.95
NPCDR1Q9BY65 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NPCDR1Q9BY65 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
NPCDR1Q9BY65 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
NPCDR1Q9BY65 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NPCDR1Q9BY65 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC20.95■□□□□ 0.94
NPCDR1Q9BY65 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NPCDR1Q9BY65 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NPCDR1Q9BY65 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NPCDR1Q9BY65 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC20.94■□□□□ 0.94
NPCDR1Q9BY65 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NPCDR1Q9BY65 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NPCDR1Q9BY65 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
NPCDR1Q9BY65 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC20.93■□□□□ 0.94
NPCDR1Q9BY65 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NPCDR1Q9BY65 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC20.93■□□□□ 0.94
NPCDR1Q9BY65 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
NPCDR1Q9BY65 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NPCDR1Q9BY65 AC006077.2-201ENST00000623591 457 ntBASIC20.91■□□□□ 0.94
NPCDR1Q9BY65 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
NPCDR1Q9BY65 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
NPCDR1Q9BY65 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC20.89■□□□□ 0.94
NPCDR1Q9BY65 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NPCDR1Q9BY65 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NPCDR1Q9BY65 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
NPCDR1Q9BY65 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
NPCDR1Q9BY65 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
NPCDR1Q9BY65 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NPCDR1Q9BY65 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
NPCDR1Q9BY65 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NPCDR1Q9BY65 AL139393.2-201ENST00000608721 2025 ntBASIC20.85■□□□□ 0.93
NPCDR1Q9BY65 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NPCDR1Q9BY65 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
NPCDR1Q9BY65 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
NPCDR1Q9BY65 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
NPCDR1Q9BY65 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
NPCDR1Q9BY65 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NPCDR1Q9BY65 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NPCDR1Q9BY65 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
NPCDR1Q9BY65 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
NPCDR1Q9BY65 DRD5P2-201ENST00000421395 2012 ntBASIC20.82■□□□□ 0.92
NPCDR1Q9BY65 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
NPCDR1Q9BY65 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NPCDR1Q9BY65 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NPCDR1Q9BY65 EBPL-203ENST00000378270 579 ntTSL 2 BASIC20.8■□□□□ 0.92
NPCDR1Q9BY65 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NPCDR1Q9BY65 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NPCDR1Q9BY65 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC20.79■□□□□ 0.92
NPCDR1Q9BY65 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NPCDR1Q9BY65 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC20.78■□□□□ 0.92
NPCDR1Q9BY65 AL121749.1-202ENST00000609313 2153 ntBASIC20.78■□□□□ 0.92
NPCDR1Q9BY65 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NPCDR1Q9BY65 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
NPCDR1Q9BY65 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NPCDR1Q9BY65 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms