Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRGV9Q99603 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRGV9Q99603 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRGV9Q99603 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TRGV9Q99603 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRGV9Q99603 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TRGV9Q99603 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
TRGV9Q99603 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRGV9Q99603 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRGV9Q99603 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRGV9Q99603 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRGV9Q99603 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
TRGV9Q99603 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRGV9Q99603 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRGV9Q99603 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRGV9Q99603 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
TRGV9Q99603 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRGV9Q99603 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC20.75■□□□□ 0.91
TRGV9Q99603 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRGV9Q99603 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRGV9Q99603 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
TRGV9Q99603 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRGV9Q99603 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
TRGV9Q99603 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC20.73■□□□□ 0.91
TRGV9Q99603 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRGV9Q99603 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRGV9Q99603 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TRGV9Q99603 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRGV9Q99603 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC20.7■□□□□ 0.9
TRGV9Q99603 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC20.7■□□□□ 0.9
TRGV9Q99603 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC20.7■□□□□ 0.9
TRGV9Q99603 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
TRGV9Q99603 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC20.69■□□□□ 0.9
TRGV9Q99603 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRGV9Q99603 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRGV9Q99603 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRGV9Q99603 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC20.68■□□□□ 0.9
TRGV9Q99603 WASH5P-204ENST00000632292 975 ntBASIC20.67■□□□□ 0.9
TRGV9Q99603 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRGV9Q99603 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC20.66■□□□□ 0.9
TRGV9Q99603 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRGV9Q99603 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRGV9Q99603 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC20.65■□□□□ 0.9
TRGV9Q99603 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRGV9Q99603 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC20.65■□□□□ 0.9
TRGV9Q99603 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
TRGV9Q99603 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TRGV9Q99603 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRGV9Q99603 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRGV9Q99603 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TRGV9Q99603 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TRGV9Q99603 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC20.62■□□□□ 0.89
TRGV9Q99603 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC20.62■□□□□ 0.89
TRGV9Q99603 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRGV9Q99603 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRGV9Q99603 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRGV9Q99603 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRGV9Q99603 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRGV9Q99603 KLF16-203ENST00000592313 508 ntTSL 3 BASIC20.61■□□□□ 0.89
TRGV9Q99603 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRGV9Q99603 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC20.6■□□□□ 0.89
TRGV9Q99603 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC20.59■□□□□ 0.89
TRGV9Q99603 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRGV9Q99603 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRGV9Q99603 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TRGV9Q99603 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRGV9Q99603 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TRGV9Q99603 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TRGV9Q99603 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TRGV9Q99603 AL133380.1-201ENST00000506013 324 ntBASIC20.57■□□□□ 0.88
TRGV9Q99603 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
TRGV9Q99603 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC20.56■□□□□ 0.88
TRGV9Q99603 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRGV9Q99603 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRGV9Q99603 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRGV9Q99603 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC20.54■□□□□ 0.88
TRGV9Q99603 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC20.54■□□□□ 0.88
TRGV9Q99603 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRGV9Q99603 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRGV9Q99603 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC20.53■□□□□ 0.88
TRGV9Q99603 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC20.53■□□□□ 0.88
TRGV9Q99603 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
TRGV9Q99603 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC20.53■□□□□ 0.88
TRGV9Q99603 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRGV9Q99603 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRGV9Q99603 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRGV9Q99603 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRGV9Q99603 AC142086.6-201ENST00000621154 1765 ntBASIC20.52■□□□□ 0.88
TRGV9Q99603 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC20.52■□□□□ 0.88
TRGV9Q99603 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
TRGV9Q99603 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRGV9Q99603 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
TRGV9Q99603 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TRGV9Q99603 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRGV9Q99603 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRGV9Q99603 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC20.5■□□□□ 0.87
TRGV9Q99603 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRGV9Q99603 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
TRGV9Q99603 AL139393.2-201ENST00000608721 2025 ntBASIC20.49■□□□□ 0.87
TRGV9Q99603 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms