Protein–RNA interactions for Protein: Q8IYE0

CCDC146, Coiled-coil domain-containing protein 146, humanhuman

Predictions only

Length 955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC146Q8IYE0 MIR762-201ENST00000390236 83 ntBASIC35.49■■■■□ 3.27
CCDC146Q8IYE0 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC35.48■■■■□ 3.27
CCDC146Q8IYE0 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC35.48■■■■□ 3.27
CCDC146Q8IYE0 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC35.48■■■■□ 3.27
CCDC146Q8IYE0 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC35.47■■■■□ 3.27
CCDC146Q8IYE0 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC35.47■■■■□ 3.27
CCDC146Q8IYE0 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC35.45■■■■□ 3.27
CCDC146Q8IYE0 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC35.45■■■■□ 3.27
CCDC146Q8IYE0 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC35.44■■■■□ 3.26
CCDC146Q8IYE0 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC35.44■■■■□ 3.26
CCDC146Q8IYE0 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC35.44■■■■□ 3.26
CCDC146Q8IYE0 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC35.44■■■■□ 3.26
CCDC146Q8IYE0 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC35.44■■■■□ 3.26
CCDC146Q8IYE0 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC35.44■■■■□ 3.26
CCDC146Q8IYE0 HNRNPLP2-201ENST00000568980 1570 ntBASIC35.43■■■■□ 3.26
CCDC146Q8IYE0 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC35.43■■■■□ 3.26
CCDC146Q8IYE0 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC35.43■■■■□ 3.26
CCDC146Q8IYE0 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC35.43■■■■□ 3.26
CCDC146Q8IYE0 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC35.42■■■■□ 3.26
CCDC146Q8IYE0 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC35.4■■■■□ 3.26
CCDC146Q8IYE0 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC35.39■■■■□ 3.26
CCDC146Q8IYE0 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC35.39■■■■□ 3.26
CCDC146Q8IYE0 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC35.39■■■■□ 3.26
CCDC146Q8IYE0 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC35.38■■■■□ 3.25
CCDC146Q8IYE0 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC35.37■■■■□ 3.25
CCDC146Q8IYE0 CHML-205ENST00000638160 705 ntTSL 3 BASIC35.37■■■■□ 3.25
CCDC146Q8IYE0 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC35.37■■■■□ 3.25
CCDC146Q8IYE0 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC35.36■■■■□ 3.25
CCDC146Q8IYE0 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC35.35■■■■□ 3.25
CCDC146Q8IYE0 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC35.35■■■■□ 3.25
CCDC146Q8IYE0 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC35.35■■■■□ 3.25
CCDC146Q8IYE0 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC35.35■■■■□ 3.25
CCDC146Q8IYE0 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC35.35■■■■□ 3.25
CCDC146Q8IYE0 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC35.34■■■■□ 3.25
CCDC146Q8IYE0 NRG1-221ENST00000614767 762 ntTSL 5 BASIC35.34■■■■□ 3.25
CCDC146Q8IYE0 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC35.34■■■■□ 3.25
CCDC146Q8IYE0 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC35.33■■■■□ 3.25
CCDC146Q8IYE0 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC35.33■■■■□ 3.25
CCDC146Q8IYE0 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC35.33■■■■□ 3.25
CCDC146Q8IYE0 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC35.32■■■■□ 3.24
CCDC146Q8IYE0 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC35.32■■■■□ 3.24
CCDC146Q8IYE0 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC35.32■■■■□ 3.24
CCDC146Q8IYE0 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC35.31■■■■□ 3.24
CCDC146Q8IYE0 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC35.31■■■■□ 3.24
CCDC146Q8IYE0 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC35.3■■■■□ 3.24
CCDC146Q8IYE0 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC35.3■■■■□ 3.24
CCDC146Q8IYE0 DUX4L28-201ENST00000623687 678 ntBASIC35.29■■■■□ 3.24
CCDC146Q8IYE0 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC35.28■■■■□ 3.24
CCDC146Q8IYE0 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC35.28■■■■□ 3.24
CCDC146Q8IYE0 AC005559.1-201ENST00000589661 871 ntBASIC35.28■■■■□ 3.24
CCDC146Q8IYE0 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC35.28■■■■□ 3.24
CCDC146Q8IYE0 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC35.27■■■■□ 3.24
CCDC146Q8IYE0 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC35.27■■■■□ 3.24
CCDC146Q8IYE0 AL162393.1-201ENST00000437852 946 ntBASIC35.27■■■■□ 3.24
CCDC146Q8IYE0 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC35.27■■■■□ 3.24
CCDC146Q8IYE0 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC35.27■■■■□ 3.24
CCDC146Q8IYE0 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC35.26■■■■□ 3.24
CCDC146Q8IYE0 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC35.23■■■■□ 3.23
CCDC146Q8IYE0 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC35.23■■■■□ 3.23
CCDC146Q8IYE0 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC35.23■■■■□ 3.23
CCDC146Q8IYE0 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC35.22■■■■□ 3.23
CCDC146Q8IYE0 ABCB10P1-201ENST00000614297 2181 ntBASIC35.22■■■■□ 3.23
CCDC146Q8IYE0 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC35.2■■■■□ 3.23
CCDC146Q8IYE0 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC35.2■■■■□ 3.23
CCDC146Q8IYE0 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC35.2■■■■□ 3.23
CCDC146Q8IYE0 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC35.2■■■■□ 3.22
CCDC146Q8IYE0 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC35.19■■■■□ 3.22
CCDC146Q8IYE0 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC35.19■■■■□ 3.22
CCDC146Q8IYE0 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC35.19■■■■□ 3.22
CCDC146Q8IYE0 AL135925.1-201ENST00000605920 1701 ntBASIC35.18■■■■□ 3.22
CCDC146Q8IYE0 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC35.18■■■■□ 3.22
CCDC146Q8IYE0 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC35.17■■■■□ 3.22
CCDC146Q8IYE0 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC35.16■■■■□ 3.22
CCDC146Q8IYE0 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC35.16■■■■□ 3.22
CCDC146Q8IYE0 AP006261.1-201ENST00000584783 668 ntBASIC35.16■■■■□ 3.22
CCDC146Q8IYE0 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC35.16■■■■□ 3.22
CCDC146Q8IYE0 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC35.15■■■■□ 3.22
CCDC146Q8IYE0 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC35.14■■■■□ 3.22
CCDC146Q8IYE0 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC35.14■■■■□ 3.22
CCDC146Q8IYE0 RPS2P35-201ENST00000443417 897 ntBASIC35.14■■■■□ 3.22
CCDC146Q8IYE0 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC35.13■■■■□ 3.21
CCDC146Q8IYE0 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC35.12■■■■□ 3.21
CCDC146Q8IYE0 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC35.11■■■■□ 3.21
CCDC146Q8IYE0 MIR3665-201ENST00000578708 105 ntBASIC35.11■■■■□ 3.21
CCDC146Q8IYE0 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC35.11■■■■□ 3.21
CCDC146Q8IYE0 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC35.09■■■■□ 3.21
CCDC146Q8IYE0 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC35.09■■■■□ 3.21
CCDC146Q8IYE0 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC35.09■■■■□ 3.21
CCDC146Q8IYE0 RPS2-209ENST00000529806 993 ntTSL 3 BASIC35.09■■■■□ 3.21
CCDC146Q8IYE0 ST7-AS1-201ENST00000456775 1889 ntBASIC35.09■■■■□ 3.21
CCDC146Q8IYE0 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC35.08■■■■□ 3.21
CCDC146Q8IYE0 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC35.08■■■■□ 3.21
CCDC146Q8IYE0 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC35.08■■■■□ 3.21
CCDC146Q8IYE0 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC35.08■■■■□ 3.21
CCDC146Q8IYE0 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC35.08■■■■□ 3.21
CCDC146Q8IYE0 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC35.07■■■■□ 3.2
CCDC146Q8IYE0 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC35.05■■■■□ 3.2
CCDC146Q8IYE0 AC087741.3-201ENST00000624270 1347 ntBASIC35.05■■■■□ 3.2
CCDC146Q8IYE0 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC35.04■■■■□ 3.2
CCDC146Q8IYE0 AC010864.1-201ENST00000609407 1511 ntBASIC35.04■■■■□ 3.2
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms