Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
RAI1Q7Z5J4 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
RAI1Q7Z5J4 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
RAI1Q7Z5J4 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC23.07■■□□□ 1.28
RAI1Q7Z5J4 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RAI1Q7Z5J4 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RAI1Q7Z5J4 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
RAI1Q7Z5J4 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RAI1Q7Z5J4 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC23.06■■□□□ 1.28
RAI1Q7Z5J4 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
RAI1Q7Z5J4 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC23.06■■□□□ 1.28
RAI1Q7Z5J4 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RAI1Q7Z5J4 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RAI1Q7Z5J4 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RAI1Q7Z5J4 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RAI1Q7Z5J4 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
RAI1Q7Z5J4 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RAI1Q7Z5J4 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
RAI1Q7Z5J4 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC23.03■■□□□ 1.28
RAI1Q7Z5J4 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RAI1Q7Z5J4 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
RAI1Q7Z5J4 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC23.02■■□□□ 1.28
RAI1Q7Z5J4 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC23.02■■□□□ 1.28
RAI1Q7Z5J4 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RAI1Q7Z5J4 DUX4L29-201ENST00000425409 679 ntBASIC23.01■■□□□ 1.27
RAI1Q7Z5J4 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RAI1Q7Z5J4 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC23.01■■□□□ 1.27
RAI1Q7Z5J4 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC23■■□□□ 1.27
RAI1Q7Z5J4 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
RAI1Q7Z5J4 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
RAI1Q7Z5J4 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RAI1Q7Z5J4 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RAI1Q7Z5J4 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
RAI1Q7Z5J4 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC22.97■■□□□ 1.27
RAI1Q7Z5J4 AC108673.1-201ENST00000510422 1159 ntBASIC22.97■■□□□ 1.27
RAI1Q7Z5J4 AC120057.4-201ENST00000624722 1615 ntBASIC22.97■■□□□ 1.27
RAI1Q7Z5J4 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RAI1Q7Z5J4 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
RAI1Q7Z5J4 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
RAI1Q7Z5J4 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC22.96■■□□□ 1.27
RAI1Q7Z5J4 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RAI1Q7Z5J4 MACF1-219ENST00000484793 834 ntTSL 2 BASIC22.94■■□□□ 1.26
RAI1Q7Z5J4 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC22.94■■□□□ 1.26
RAI1Q7Z5J4 AC021231.2-201ENST00000594613 730 ntBASIC22.94■■□□□ 1.26
RAI1Q7Z5J4 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
RAI1Q7Z5J4 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
RAI1Q7Z5J4 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
RAI1Q7Z5J4 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
RAI1Q7Z5J4 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
RAI1Q7Z5J4 MIR4449-201ENST00000578365 66 ntBASIC22.92■■□□□ 1.26
RAI1Q7Z5J4 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC22.91■■□□□ 1.26
RAI1Q7Z5J4 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
RAI1Q7Z5J4 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC22.91■■□□□ 1.26
RAI1Q7Z5J4 MIR6090-201ENST00000622481 60 ntBASIC22.9■■□□□ 1.26
RAI1Q7Z5J4 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
RAI1Q7Z5J4 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC22.9■■□□□ 1.26
RAI1Q7Z5J4 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC22.9■■□□□ 1.26
RAI1Q7Z5J4 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC22.9■■□□□ 1.26
RAI1Q7Z5J4 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC22.9■■□□□ 1.26
RAI1Q7Z5J4 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC22.89■■□□□ 1.26
RAI1Q7Z5J4 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RAI1Q7Z5J4 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
RAI1Q7Z5J4 GDI1-215ENST00000630693 786 ntTSL 4 BASIC22.88■■□□□ 1.25
RAI1Q7Z5J4 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
RAI1Q7Z5J4 CR559946.2-201ENST00000623684 991 ntBASIC22.87■■□□□ 1.25
RAI1Q7Z5J4 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RAI1Q7Z5J4 CIB2-204ENST00000557846 934 ntTSL 3 BASIC22.86■■□□□ 1.25
RAI1Q7Z5J4 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC22.86■■□□□ 1.25
RAI1Q7Z5J4 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC22.86■■□□□ 1.25
RAI1Q7Z5J4 MIR3648-2-201ENST00000581792 180 ntBASIC22.86■■□□□ 1.25
RAI1Q7Z5J4 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC22.86■■□□□ 1.25
RAI1Q7Z5J4 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC22.86■■□□□ 1.25
RAI1Q7Z5J4 MIR3648-1-201ENST00000615959 180 ntBASIC22.86■■□□□ 1.25
RAI1Q7Z5J4 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
RAI1Q7Z5J4 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC22.84■■□□□ 1.25
RAI1Q7Z5J4 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC22.84■■□□□ 1.25
RAI1Q7Z5J4 AC016575.1-201ENST00000607026 382 ntBASIC22.84■■□□□ 1.25
RAI1Q7Z5J4 RNF166-209ENST00000567844 633 ntTSL 5 BASIC22.83■■□□□ 1.25
RAI1Q7Z5J4 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
RAI1Q7Z5J4 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
RAI1Q7Z5J4 MIR639-201ENST00000384974 98 ntBASIC22.82■■□□□ 1.24
RAI1Q7Z5J4 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC22.82■■□□□ 1.24
RAI1Q7Z5J4 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
RAI1Q7Z5J4 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
RAI1Q7Z5J4 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
RAI1Q7Z5J4 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
RAI1Q7Z5J4 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
RAI1Q7Z5J4 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
RAI1Q7Z5J4 AGPS-202ENST00000409888 815 ntTSL 4 BASIC22.8■■□□□ 1.24
RAI1Q7Z5J4 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC22.8■■□□□ 1.24
RAI1Q7Z5J4 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC22.8■■□□□ 1.24
RAI1Q7Z5J4 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
RAI1Q7Z5J4 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC22.8■■□□□ 1.24
RAI1Q7Z5J4 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
RAI1Q7Z5J4 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
RAI1Q7Z5J4 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
RAI1Q7Z5J4 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC22.76■■□□□ 1.23
RAI1Q7Z5J4 LINC01971-201ENST00000617888 1048 ntBASIC22.76■■□□□ 1.23
RAI1Q7Z5J4 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC22.76■■□□□ 1.23
RAI1Q7Z5J4 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms