Protein–RNA interactions for Protein: O60343

TBC1D4, TBC1 domain family member 4, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4O60343 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC28.5■■■□□ 2.15
TBC1D4O60343 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
TBC1D4O60343 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
TBC1D4O60343 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC28.49■■■□□ 2.15
TBC1D4O60343 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC28.49■■■□□ 2.15
TBC1D4O60343 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC28.49■■■□□ 2.15
TBC1D4O60343 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC28.49■■■□□ 2.15
TBC1D4O60343 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC28.49■■■□□ 2.15
TBC1D4O60343 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC28.49■■■□□ 2.15
TBC1D4O60343 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
TBC1D4O60343 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC28.46■■■□□ 2.15
TBC1D4O60343 HGH1-207ENST00000628266 258 ntTSL 5 BASIC28.46■■■□□ 2.15
TBC1D4O60343 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
TBC1D4O60343 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
TBC1D4O60343 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
TBC1D4O60343 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
TBC1D4O60343 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
TBC1D4O60343 ZNRF2P2-203ENST00000454624 420 ntBASIC28.43■■■□□ 2.14
TBC1D4O60343 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
TBC1D4O60343 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
TBC1D4O60343 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC28.42■■■□□ 2.14
TBC1D4O60343 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
TBC1D4O60343 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC28.41■■■□□ 2.14
TBC1D4O60343 MIR6090-201ENST00000622481 60 ntBASIC28.41■■■□□ 2.14
TBC1D4O60343 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
TBC1D4O60343 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC28.4■■■□□ 2.14
TBC1D4O60343 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
TBC1D4O60343 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
TBC1D4O60343 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
TBC1D4O60343 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC28.39■■■□□ 2.14
TBC1D4O60343 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
TBC1D4O60343 AC108673.1-201ENST00000510422 1159 ntBASIC28.38■■■□□ 2.13
TBC1D4O60343 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC28.38■■■□□ 2.13
TBC1D4O60343 DUX4L29-201ENST00000425409 679 ntBASIC28.37■■■□□ 2.13
TBC1D4O60343 PVT1-219ENST00000523427 938 ntTSL 3 BASIC28.37■■■□□ 2.13
TBC1D4O60343 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
TBC1D4O60343 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
TBC1D4O60343 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC28.36■■■□□ 2.13
TBC1D4O60343 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC28.35■■■□□ 2.13
TBC1D4O60343 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
TBC1D4O60343 AC021231.2-201ENST00000594613 730 ntBASIC28.35■■■□□ 2.13
TBC1D4O60343 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC28.34■■■□□ 2.13
TBC1D4O60343 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC28.34■■■□□ 2.13
TBC1D4O60343 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC28.34■■■□□ 2.13
TBC1D4O60343 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
TBC1D4O60343 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC28.31■■■□□ 2.12
TBC1D4O60343 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
TBC1D4O60343 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
TBC1D4O60343 CIB2-204ENST00000557846 934 ntTSL 3 BASIC28.31■■■□□ 2.12
TBC1D4O60343 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
TBC1D4O60343 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC28.29■■■□□ 2.12
TBC1D4O60343 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
TBC1D4O60343 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
TBC1D4O60343 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC28.29■■■□□ 2.12
TBC1D4O60343 HLA-V-202ENST00000446817 847 ntBASIC28.29■■■□□ 2.12
TBC1D4O60343 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC28.28■■■□□ 2.12
TBC1D4O60343 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC28.28■■■□□ 2.12
TBC1D4O60343 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC28.28■■■□□ 2.12
TBC1D4O60343 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
TBC1D4O60343 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
TBC1D4O60343 MBP-237ENST00000579129 1052 ntTSL 5 BASIC28.26■■■□□ 2.11
TBC1D4O60343 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC28.25■■■□□ 2.11
TBC1D4O60343 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC28.25■■■□□ 2.11
TBC1D4O60343 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC28.25■■■□□ 2.11
TBC1D4O60343 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC28.24■■■□□ 2.11
TBC1D4O60343 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC28.24■■■□□ 2.11
TBC1D4O60343 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
TBC1D4O60343 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
TBC1D4O60343 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
TBC1D4O60343 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
TBC1D4O60343 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
TBC1D4O60343 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
TBC1D4O60343 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
TBC1D4O60343 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC28.21■■■□□ 2.11
TBC1D4O60343 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC28.21■■■□□ 2.11
TBC1D4O60343 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
TBC1D4O60343 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC28.21■■■□□ 2.11
TBC1D4O60343 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
TBC1D4O60343 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC28.2■■■□□ 2.1
TBC1D4O60343 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
TBC1D4O60343 AL161658.1-201ENST00000623641 1967 ntBASIC28.19■■■□□ 2.1
TBC1D4O60343 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC28.19■■■□□ 2.1
TBC1D4O60343 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC28.18■■■□□ 2.1
TBC1D4O60343 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC28.18■■■□□ 2.1
TBC1D4O60343 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
TBC1D4O60343 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC28.16■■■□□ 2.1
TBC1D4O60343 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC28.16■■■□□ 2.1
TBC1D4O60343 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
TBC1D4O60343 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
TBC1D4O60343 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
TBC1D4O60343 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
TBC1D4O60343 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
TBC1D4O60343 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC28.14■■■□□ 2.1
TBC1D4O60343 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC28.13■■■□□ 2.09
TBC1D4O60343 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC28.13■■■□□ 2.09
TBC1D4O60343 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
TBC1D4O60343 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC28.12■■■□□ 2.09
TBC1D4O60343 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC28.12■■■□□ 2.09
TBC1D4O60343 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC28.11■■■□□ 2.09
TBC1D4O60343 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms