Protein–RNA interactions for Protein: O15399

GRIN2D, Glutamate receptor ionotropic, NMDA 2D, humanhuman

Predictions only

Length 1,336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN2DO15399 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC30.13■■■□□ 2.41
GRIN2DO15399 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC30.12■■■□□ 2.41
GRIN2DO15399 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
GRIN2DO15399 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
GRIN2DO15399 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
GRIN2DO15399 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
GRIN2DO15399 MIR6090-201ENST00000622481 60 ntBASIC30.08■■■□□ 2.41
GRIN2DO15399 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
GRIN2DO15399 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
GRIN2DO15399 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
GRIN2DO15399 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC30.07■■■□□ 2.4
GRIN2DO15399 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC30.06■■■□□ 2.4
GRIN2DO15399 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC30.06■■■□□ 2.4
GRIN2DO15399 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
GRIN2DO15399 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
GRIN2DO15399 CIB2-204ENST00000557846 934 ntTSL 3 BASIC30.05■■■□□ 2.4
GRIN2DO15399 MIR4449-201ENST00000578365 66 ntBASIC30.05■■■□□ 2.4
GRIN2DO15399 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC30.04■■■□□ 2.4
GRIN2DO15399 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
GRIN2DO15399 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC30.03■■■□□ 2.4
GRIN2DO15399 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC30.03■■■□□ 2.4
GRIN2DO15399 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC30.02■■■□□ 2.4
GRIN2DO15399 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC30.02■■■□□ 2.4
GRIN2DO15399 MIR639-201ENST00000384974 98 ntBASIC30.01■■■□□ 2.4
GRIN2DO15399 MACF1-219ENST00000484793 834 ntTSL 2 BASIC30.01■■■□□ 2.4
GRIN2DO15399 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC30.01■■■□□ 2.39
GRIN2DO15399 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC30.01■■■□□ 2.39
GRIN2DO15399 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
GRIN2DO15399 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
GRIN2DO15399 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC30■■■□□ 2.39
GRIN2DO15399 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC30■■■□□ 2.39
GRIN2DO15399 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC29.99■■■□□ 2.39
GRIN2DO15399 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC29.99■■■□□ 2.39
GRIN2DO15399 AC108673.1-201ENST00000510422 1159 ntBASIC29.98■■■□□ 2.39
GRIN2DO15399 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC29.98■■■□□ 2.39
GRIN2DO15399 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC29.97■■■□□ 2.39
GRIN2DO15399 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC29.97■■■□□ 2.39
GRIN2DO15399 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
GRIN2DO15399 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC29.95■■■□□ 2.39
GRIN2DO15399 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC29.95■■■□□ 2.39
GRIN2DO15399 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
GRIN2DO15399 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC29.94■■■□□ 2.38
GRIN2DO15399 MIR3648-2-201ENST00000581792 180 ntBASIC29.94■■■□□ 2.38
GRIN2DO15399 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
GRIN2DO15399 MIR3648-1-201ENST00000615959 180 ntBASIC29.94■■■□□ 2.38
GRIN2DO15399 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC29.93■■■□□ 2.38
GRIN2DO15399 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
GRIN2DO15399 RNF166-209ENST00000567844 633 ntTSL 5 BASIC29.93■■■□□ 2.38
GRIN2DO15399 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC29.93■■■□□ 2.38
GRIN2DO15399 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC29.91■■■□□ 2.38
GRIN2DO15399 AC016575.1-201ENST00000607026 382 ntBASIC29.91■■■□□ 2.38
GRIN2DO15399 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC29.91■■■□□ 2.38
GRIN2DO15399 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
GRIN2DO15399 GDI1-215ENST00000630693 786 ntTSL 4 BASIC29.9■■■□□ 2.38
GRIN2DO15399 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
GRIN2DO15399 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC29.89■■■□□ 2.38
GRIN2DO15399 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC29.89■■■□□ 2.38
GRIN2DO15399 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC29.88■■■□□ 2.37
GRIN2DO15399 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
GRIN2DO15399 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC29.87■■■□□ 2.37
GRIN2DO15399 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
GRIN2DO15399 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC29.86■■■□□ 2.37
GRIN2DO15399 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
GRIN2DO15399 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
GRIN2DO15399 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
GRIN2DO15399 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC29.86■■■□□ 2.37
GRIN2DO15399 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC29.85■■■□□ 2.37
GRIN2DO15399 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC29.84■■■□□ 2.37
GRIN2DO15399 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
GRIN2DO15399 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC29.84■■■□□ 2.37
GRIN2DO15399 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
GRIN2DO15399 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
GRIN2DO15399 DUX4L11-201ENST00000611504 1267 ntBASIC29.83■■■□□ 2.37
GRIN2DO15399 DUX4L12-201ENST00000614593 1267 ntBASIC29.83■■■□□ 2.37
GRIN2DO15399 DUX4L14-201ENST00000621227 1267 ntBASIC29.83■■■□□ 2.37
GRIN2DO15399 CR559946.2-201ENST00000623684 991 ntBASIC29.83■■■□□ 2.37
GRIN2DO15399 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
GRIN2DO15399 LINC01971-201ENST00000617888 1048 ntBASIC29.81■■■□□ 2.36
GRIN2DO15399 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC29.81■■■□□ 2.36
GRIN2DO15399 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
GRIN2DO15399 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
GRIN2DO15399 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
GRIN2DO15399 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC29.8■■■□□ 2.36
GRIN2DO15399 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
GRIN2DO15399 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
GRIN2DO15399 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
GRIN2DO15399 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC29.78■■■□□ 2.36
GRIN2DO15399 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC29.78■■■□□ 2.36
GRIN2DO15399 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC29.77■■■□□ 2.36
GRIN2DO15399 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC29.77■■■□□ 2.36
GRIN2DO15399 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
GRIN2DO15399 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC29.75■■■□□ 2.35
GRIN2DO15399 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC29.75■■■□□ 2.35
GRIN2DO15399 CALM3-209ENST00000597743 577 ntTSL 4 BASIC29.75■■■□□ 2.35
GRIN2DO15399 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
GRIN2DO15399 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC29.74■■■□□ 2.35
GRIN2DO15399 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC29.73■■■□□ 2.35
GRIN2DO15399 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC29.73■■■□□ 2.35
GRIN2DO15399 AGPS-202ENST00000409888 815 ntTSL 4 BASIC29.72■■■□□ 2.35
GRIN2DO15399 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms