Protein–RNA interactions for Protein: O00483

NDUFA4, Cytochrome c oxidase subunit NDUFA4, humanhuman

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4O00483 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
NDUFA4O00483 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NDUFA4O00483 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
NDUFA4O00483 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NDUFA4O00483 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NDUFA4O00483 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NDUFA4O00483 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
NDUFA4O00483 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC20.44■□□□□ 0.86
NDUFA4O00483 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
NDUFA4O00483 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC20.44■□□□□ 0.86
NDUFA4O00483 DENR-202ENST00000455982 1052 ntTSL 5 BASIC20.44■□□□□ 0.86
NDUFA4O00483 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NDUFA4O00483 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC20.43■□□□□ 0.86
NDUFA4O00483 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NDUFA4O00483 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NDUFA4O00483 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
NDUFA4O00483 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC20.42■□□□□ 0.86
NDUFA4O00483 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
NDUFA4O00483 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC20.41■□□□□ 0.86
NDUFA4O00483 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NDUFA4O00483 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
NDUFA4O00483 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
NDUFA4O00483 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
NDUFA4O00483 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
NDUFA4O00483 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC20.38■□□□□ 0.85
NDUFA4O00483 AL135925.1-201ENST00000605920 1701 ntBASIC20.38■□□□□ 0.85
NDUFA4O00483 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC20.37■□□□□ 0.85
NDUFA4O00483 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC20.37■□□□□ 0.85
NDUFA4O00483 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NDUFA4O00483 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
NDUFA4O00483 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NDUFA4O00483 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NDUFA4O00483 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NDUFA4O00483 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NDUFA4O00483 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NDUFA4O00483 ST7-AS1-201ENST00000456775 1889 ntBASIC20.35■□□□□ 0.85
NDUFA4O00483 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
NDUFA4O00483 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NDUFA4O00483 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NDUFA4O00483 ABCB10P1-201ENST00000614297 2181 ntBASIC20.34■□□□□ 0.85
NDUFA4O00483 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NDUFA4O00483 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NDUFA4O00483 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC20.33■□□□□ 0.85
NDUFA4O00483 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
NDUFA4O00483 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NDUFA4O00483 SUZ12P1-203ENST00000578195 985 ntBASIC20.32■□□□□ 0.84
NDUFA4O00483 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC20.32■□□□□ 0.84
NDUFA4O00483 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NDUFA4O00483 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NDUFA4O00483 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC20.31■□□□□ 0.84
NDUFA4O00483 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NDUFA4O00483 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NDUFA4O00483 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
NDUFA4O00483 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NDUFA4O00483 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
NDUFA4O00483 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
NDUFA4O00483 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NDUFA4O00483 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NDUFA4O00483 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NDUFA4O00483 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC20.28■□□□□ 0.84
NDUFA4O00483 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NDUFA4O00483 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NDUFA4O00483 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
NDUFA4O00483 MIR762-201ENST00000390236 83 ntBASIC20.27■□□□□ 0.84
NDUFA4O00483 CHML-205ENST00000638160 705 ntTSL 3 BASIC20.27■□□□□ 0.84
NDUFA4O00483 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
NDUFA4O00483 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
NDUFA4O00483 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC20.26■□□□□ 0.83
NDUFA4O00483 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC20.26■□□□□ 0.83
NDUFA4O00483 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NDUFA4O00483 HNRNPLP2-201ENST00000568980 1570 ntBASIC20.25■□□□□ 0.83
NDUFA4O00483 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
NDUFA4O00483 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
NDUFA4O00483 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC20.25■□□□□ 0.83
NDUFA4O00483 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NDUFA4O00483 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NDUFA4O00483 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NDUFA4O00483 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
NDUFA4O00483 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
NDUFA4O00483 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NDUFA4O00483 AC010864.1-201ENST00000609407 1511 ntBASIC20.23■□□□□ 0.83
NDUFA4O00483 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NDUFA4O00483 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC20.23■□□□□ 0.83
NDUFA4O00483 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
NDUFA4O00483 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NDUFA4O00483 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC20.21■□□□□ 0.83
NDUFA4O00483 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NDUFA4O00483 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NDUFA4O00483 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NDUFA4O00483 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
NDUFA4O00483 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NDUFA4O00483 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NDUFA4O00483 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
NDUFA4O00483 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NDUFA4O00483 AC005559.1-201ENST00000589661 871 ntBASIC20.19■□□□□ 0.82
NDUFA4O00483 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
NDUFA4O00483 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
NDUFA4O00483 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NDUFA4O00483 RPS2-209ENST00000529806 993 ntTSL 3 BASIC20.18■□□□□ 0.82
NDUFA4O00483 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms