Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
TLR4O00206 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC26.58■■□□□ 1.85
TLR4O00206 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
TLR4O00206 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
TLR4O00206 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC26.56■■□□□ 1.84
TLR4O00206 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
TLR4O00206 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
TLR4O00206 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
TLR4O00206 CIB2-204ENST00000557846 934 ntTSL 3 BASIC26.55■■□□□ 1.84
TLR4O00206 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC26.54■■□□□ 1.84
TLR4O00206 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
TLR4O00206 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
TLR4O00206 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC26.52■■□□□ 1.84
TLR4O00206 AC108673.1-201ENST00000510422 1159 ntBASIC26.52■■□□□ 1.84
TLR4O00206 AC021231.2-201ENST00000594613 730 ntBASIC26.52■■□□□ 1.84
TLR4O00206 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
TLR4O00206 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
TLR4O00206 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
TLR4O00206 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
TLR4O00206 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC26.49■■□□□ 1.83
TLR4O00206 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
TLR4O00206 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
TLR4O00206 MIR6090-201ENST00000622481 60 ntBASIC26.48■■□□□ 1.83
TLR4O00206 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC26.48■■□□□ 1.83
TLR4O00206 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
TLR4O00206 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC26.47■■□□□ 1.83
TLR4O00206 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC26.47■■□□□ 1.83
TLR4O00206 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
TLR4O00206 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
TLR4O00206 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC26.46■■□□□ 1.83
TLR4O00206 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC26.46■■□□□ 1.83
TLR4O00206 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
TLR4O00206 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
TLR4O00206 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
TLR4O00206 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
TLR4O00206 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC26.45■■□□□ 1.82
TLR4O00206 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC26.44■■□□□ 1.82
TLR4O00206 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
TLR4O00206 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC26.43■■□□□ 1.82
TLR4O00206 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
TLR4O00206 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC26.41■■□□□ 1.82
TLR4O00206 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
TLR4O00206 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
TLR4O00206 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC26.4■■□□□ 1.82
TLR4O00206 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
TLR4O00206 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
TLR4O00206 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
TLR4O00206 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
TLR4O00206 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
TLR4O00206 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC26.36■■□□□ 1.81
TLR4O00206 AC120057.4-201ENST00000624722 1615 ntBASIC26.34■■□□□ 1.81
TLR4O00206 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC26.34■■□□□ 1.81
TLR4O00206 RPS2-202ENST00000526522 924 ntTSL 2 BASIC26.33■■□□□ 1.81
TLR4O00206 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
TLR4O00206 MACF1-219ENST00000484793 834 ntTSL 2 BASIC26.32■■□□□ 1.8
TLR4O00206 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC26.32■■□□□ 1.8
TLR4O00206 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
TLR4O00206 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
TLR4O00206 ST7-205ENST00000393446 2114 ntTSL 5 BASIC26.3■■□□□ 1.8
TLR4O00206 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
TLR4O00206 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC26.3■■□□□ 1.8
TLR4O00206 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
TLR4O00206 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC26.3■■□□□ 1.8
TLR4O00206 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC26.3■■□□□ 1.8
TLR4O00206 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
TLR4O00206 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC26.29■■□□□ 1.8
TLR4O00206 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
TLR4O00206 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
TLR4O00206 RNF166-209ENST00000567844 633 ntTSL 5 BASIC26.28■■□□□ 1.8
TLR4O00206 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
TLR4O00206 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
TLR4O00206 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC26.27■■□□□ 1.8
TLR4O00206 MIR639-201ENST00000384974 98 ntBASIC26.27■■□□□ 1.8
TLR4O00206 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
TLR4O00206 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC26.27■■□□□ 1.8
TLR4O00206 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC26.27■■□□□ 1.8
TLR4O00206 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
TLR4O00206 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
TLR4O00206 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC26.26■■□□□ 1.79
TLR4O00206 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
TLR4O00206 MIR4449-201ENST00000578365 66 ntBASIC26.25■■□□□ 1.79
TLR4O00206 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
TLR4O00206 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC26.25■■□□□ 1.79
TLR4O00206 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC26.25■■□□□ 1.79
TLR4O00206 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
TLR4O00206 MIR3648-2-201ENST00000581792 180 ntBASIC26.24■■□□□ 1.79
TLR4O00206 MIR3648-1-201ENST00000615959 180 ntBASIC26.24■■□□□ 1.79
TLR4O00206 LINC01971-201ENST00000617888 1048 ntBASIC26.24■■□□□ 1.79
TLR4O00206 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
TLR4O00206 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC26.24■■□□□ 1.79
TLR4O00206 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC26.24■■□□□ 1.79
TLR4O00206 ST7-202ENST00000323984 2142 ntTSL 5 BASIC26.23■■□□□ 1.79
TLR4O00206 ST7-207ENST00000393449 2127 ntTSL 5 BASIC26.23■■□□□ 1.79
TLR4O00206 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC26.23■■□□□ 1.79
TLR4O00206 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC26.23■■□□□ 1.79
TLR4O00206 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC26.22■■□□□ 1.79
TLR4O00206 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
TLR4O00206 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
TLR4O00206 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC26.22■■□□□ 1.79
TLR4O00206 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC26.22■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms