Protein–RNA interactions for Protein: A0A0K0K1G6

TRBV10-3, T-cell receptor beta variable 10-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV10-3A0A0K0K1G6 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV10-3A0A0K0K1G6 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV10-3A0A0K0K1G6 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC17.1■□□□□ 0.33
TRBV10-3A0A0K0K1G6 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV10-3A0A0K0K1G6 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV10-3A0A0K0K1G6 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV10-3A0A0K0K1G6 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRBV10-3A0A0K0K1G6 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC17.09■□□□□ 0.33
TRBV10-3A0A0K0K1G6 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRBV10-3A0A0K0K1G6 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC17.08■□□□□ 0.32
TRBV10-3A0A0K0K1G6 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV10-3A0A0K0K1G6 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
TRBV10-3A0A0K0K1G6 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV10-3A0A0K0K1G6 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRBV10-3A0A0K0K1G6 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV10-3A0A0K0K1G6 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
TRBV10-3A0A0K0K1G6 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
TRBV10-3A0A0K0K1G6 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRBV10-3A0A0K0K1G6 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV10-3A0A0K0K1G6 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV10-3A0A0K0K1G6 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV10-3A0A0K0K1G6 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRBV10-3A0A0K0K1G6 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV10-3A0A0K0K1G6 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV10-3A0A0K0K1G6 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV10-3A0A0K0K1G6 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRBV10-3A0A0K0K1G6 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
TRBV10-3A0A0K0K1G6 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRBV10-3A0A0K0K1G6 AC135731.1-201ENST00000569415 2548 ntBASIC17.02■□□□□ 0.32
TRBV10-3A0A0K0K1G6 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRBV10-3A0A0K0K1G6 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC17.02■□□□□ 0.32
TRBV10-3A0A0K0K1G6 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
TRBV10-3A0A0K0K1G6 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TRBV10-3A0A0K0K1G6 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRBV10-3A0A0K0K1G6 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TRBV10-3A0A0K0K1G6 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
TRBV10-3A0A0K0K1G6 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRBV10-3A0A0K0K1G6 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRBV10-3A0A0K0K1G6 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC17■□□□□ 0.31
TRBV10-3A0A0K0K1G6 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRBV10-3A0A0K0K1G6 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV10-3A0A0K0K1G6 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV10-3A0A0K0K1G6 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
TRBV10-3A0A0K0K1G6 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV10-3A0A0K0K1G6 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC16.99■□□□□ 0.31
TRBV10-3A0A0K0K1G6 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV10-3A0A0K0K1G6 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV10-3A0A0K0K1G6 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRBV10-3A0A0K0K1G6 AL135925.1-201ENST00000605920 1701 ntBASIC16.99■□□□□ 0.31
TRBV10-3A0A0K0K1G6 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRBV10-3A0A0K0K1G6 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC16.98■□□□□ 0.31
TRBV10-3A0A0K0K1G6 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRBV10-3A0A0K0K1G6 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRBV10-3A0A0K0K1G6 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRBV10-3A0A0K0K1G6 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRBV10-3A0A0K0K1G6 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRBV10-3A0A0K0K1G6 ZNRF2P1-201ENST00000441407 443 ntBASIC16.97■□□□□ 0.31
TRBV10-3A0A0K0K1G6 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRBV10-3A0A0K0K1G6 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRBV10-3A0A0K0K1G6 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRBV10-3A0A0K0K1G6 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRBV10-3A0A0K0K1G6 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRBV10-3A0A0K0K1G6 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
TRBV10-3A0A0K0K1G6 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRBV10-3A0A0K0K1G6 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC16.96■□□□□ 0.3
TRBV10-3A0A0K0K1G6 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRBV10-3A0A0K0K1G6 AC142086.6-201ENST00000621154 1765 ntBASIC16.95■□□□□ 0.3
TRBV10-3A0A0K0K1G6 EBPL-203ENST00000378270 579 ntTSL 2 BASIC16.95■□□□□ 0.3
TRBV10-3A0A0K0K1G6 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRBV10-3A0A0K0K1G6 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRBV10-3A0A0K0K1G6 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
TRBV10-3A0A0K0K1G6 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC16.94■□□□□ 0.3
TRBV10-3A0A0K0K1G6 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRBV10-3A0A0K0K1G6 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV10-3A0A0K0K1G6 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV10-3A0A0K0K1G6 DYNLL1-208ENST00000550178 581 ntBASIC16.93■□□□□ 0.3
TRBV10-3A0A0K0K1G6 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC16.93■□□□□ 0.3
TRBV10-3A0A0K0K1G6 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRBV10-3A0A0K0K1G6 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
TRBV10-3A0A0K0K1G6 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV10-3A0A0K0K1G6 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV10-3A0A0K0K1G6 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV10-3A0A0K0K1G6 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRBV10-3A0A0K0K1G6 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
TRBV10-3A0A0K0K1G6 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TRBV10-3A0A0K0K1G6 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRBV10-3A0A0K0K1G6 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
TRBV10-3A0A0K0K1G6 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TRBV10-3A0A0K0K1G6 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC16.9■□□□□ 0.3
TRBV10-3A0A0K0K1G6 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
TRBV10-3A0A0K0K1G6 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV10-3A0A0K0K1G6 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV10-3A0A0K0K1G6 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC16.89■□□□□ 0.29
TRBV10-3A0A0K0K1G6 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRBV10-3A0A0K0K1G6 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
TRBV10-3A0A0K0K1G6 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV10-3A0A0K0K1G6 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
TRBV10-3A0A0K0K1G6 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV10-3A0A0K0K1G6 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRBV10-3A0A0K0K1G6 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms