Protein–RNA interactions for Protein: S4R3C0

Uncharacterized protein (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S4R3C0 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC21.28■■□□□ 1
S4R3C0 KLF16-203ENST00000592313 508 ntTSL 3 BASIC21.28■■□□□ 1
S4R3C0 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
S4R3C0 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
S4R3C0 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
S4R3C0 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
S4R3C0 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC21.26■□□□□ 0.99
S4R3C0 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
S4R3C0 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
S4R3C0 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
S4R3C0 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC21.24■□□□□ 0.99
S4R3C0 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC21.24■□□□□ 0.99
S4R3C0 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
S4R3C0 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
S4R3C0 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
S4R3C0 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
S4R3C0 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
S4R3C0 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC21.21■□□□□ 0.99
S4R3C0 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
S4R3C0 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
S4R3C0 RARRES2P7-201ENST00000567349 469 ntBASIC21.18■□□□□ 0.98
S4R3C0 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
S4R3C0 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC21.16■□□□□ 0.98
S4R3C0 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
S4R3C0 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC21.15■□□□□ 0.98
S4R3C0 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
S4R3C0 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
S4R3C0 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
S4R3C0 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
S4R3C0 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
S4R3C0 AL133380.1-201ENST00000506013 324 ntBASIC21.11■□□□□ 0.97
S4R3C0 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC21.11■□□□□ 0.97
S4R3C0 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
S4R3C0 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
S4R3C0 AL161658.1-201ENST00000623641 1967 ntBASIC21.1■□□□□ 0.97
S4R3C0 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC21.09■□□□□ 0.97
S4R3C0 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
S4R3C0 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
S4R3C0 SETD8P1-201ENST00000623146 1180 ntBASIC21.09■□□□□ 0.97
S4R3C0 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC21.09■□□□□ 0.97
S4R3C0 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
S4R3C0 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
S4R3C0 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
S4R3C0 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC21.05■□□□□ 0.96
S4R3C0 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC21.05■□□□□ 0.96
S4R3C0 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
S4R3C0 ABCB10P1-201ENST00000614297 2181 ntBASIC21.04■□□□□ 0.96
S4R3C0 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
S4R3C0 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
S4R3C0 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
S4R3C0 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
S4R3C0 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC21.02■□□□□ 0.96
S4R3C0 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
S4R3C0 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC21.02■□□□□ 0.96
S4R3C0 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
S4R3C0 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC21.02■□□□□ 0.96
S4R3C0 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
S4R3C0 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
S4R3C0 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
S4R3C0 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
S4R3C0 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
S4R3C0 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
S4R3C0 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC20.99■□□□□ 0.95
S4R3C0 WASH5P-204ENST00000632292 975 ntBASIC20.99■□□□□ 0.95
S4R3C0 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC20.99■□□□□ 0.95
S4R3C0 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
S4R3C0 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
S4R3C0 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
S4R3C0 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
S4R3C0 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
S4R3C0 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC20.97■□□□□ 0.95
S4R3C0 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
S4R3C0 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
S4R3C0 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC20.96■□□□□ 0.95
S4R3C0 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
S4R3C0 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
S4R3C0 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
S4R3C0 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
S4R3C0 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC20.93■□□□□ 0.94
S4R3C0 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
S4R3C0 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
S4R3C0 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
S4R3C0 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
S4R3C0 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
S4R3C0 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
S4R3C0 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
S4R3C0 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
S4R3C0 AC097358.2-201ENST00000607541 1159 ntBASIC20.91■□□□□ 0.94
S4R3C0 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
S4R3C0 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
S4R3C0 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
S4R3C0 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC20.9■□□□□ 0.94
S4R3C0 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
S4R3C0 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
S4R3C0 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
S4R3C0 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
S4R3C0 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
S4R3C0 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
S4R3C0 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
S4R3C0 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms