Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
PTCH2Q9Y6C5 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC31.61■■■□□ 2.65
PTCH2Q9Y6C5 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
PTCH2Q9Y6C5 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC31.6■■■□□ 2.65
PTCH2Q9Y6C5 MIR639-201ENST00000384974 98 ntBASIC31.59■■■□□ 2.65
PTCH2Q9Y6C5 DUX4L29-201ENST00000425409 679 ntBASIC31.57■■■□□ 2.64
PTCH2Q9Y6C5 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
PTCH2Q9Y6C5 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
PTCH2Q9Y6C5 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC31.56■■■□□ 2.64
PTCH2Q9Y6C5 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC31.55■■■□□ 2.64
PTCH2Q9Y6C5 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
PTCH2Q9Y6C5 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
PTCH2Q9Y6C5 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC31.52■■■□□ 2.64
PTCH2Q9Y6C5 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
PTCH2Q9Y6C5 MACF1-219ENST00000484793 834 ntTSL 2 BASIC31.5■■■□□ 2.63
PTCH2Q9Y6C5 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC31.5■■■□□ 2.63
PTCH2Q9Y6C5 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
PTCH2Q9Y6C5 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC31.49■■■□□ 2.63
PTCH2Q9Y6C5 HSD17B1P1-201ENST00000590052 955 ntBASIC31.49■■■□□ 2.63
PTCH2Q9Y6C5 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
PTCH2Q9Y6C5 RPS2-209ENST00000529806 993 ntTSL 3 BASIC31.47■■■□□ 2.63
PTCH2Q9Y6C5 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
PTCH2Q9Y6C5 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC31.46■■■□□ 2.63
PTCH2Q9Y6C5 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC31.46■■■□□ 2.63
PTCH2Q9Y6C5 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
PTCH2Q9Y6C5 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC31.45■■■□□ 2.63
PTCH2Q9Y6C5 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
PTCH2Q9Y6C5 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC31.43■■■□□ 2.62
PTCH2Q9Y6C5 CALM3-209ENST00000597743 577 ntTSL 4 BASIC31.43■■■□□ 2.62
PTCH2Q9Y6C5 AC021231.2-201ENST00000594613 730 ntBASIC31.41■■■□□ 2.62
PTCH2Q9Y6C5 BRD4-212ENST00000630599 726 ntTSL 2 BASIC31.4■■■□□ 2.62
PTCH2Q9Y6C5 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC31.39■■■□□ 2.62
PTCH2Q9Y6C5 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
PTCH2Q9Y6C5 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
PTCH2Q9Y6C5 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
PTCH2Q9Y6C5 AC016575.1-201ENST00000607026 382 ntBASIC31.37■■■□□ 2.61
PTCH2Q9Y6C5 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC31.37■■■□□ 2.61
PTCH2Q9Y6C5 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
PTCH2Q9Y6C5 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC31.35■■■□□ 2.61
PTCH2Q9Y6C5 RNF166-209ENST00000567844 633 ntTSL 5 BASIC31.35■■■□□ 2.61
PTCH2Q9Y6C5 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC31.34■■■□□ 2.61
PTCH2Q9Y6C5 MIR3648-2-201ENST00000581792 180 ntBASIC31.34■■■□□ 2.61
PTCH2Q9Y6C5 MIR3648-1-201ENST00000615959 180 ntBASIC31.34■■■□□ 2.61
PTCH2Q9Y6C5 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC31.34■■■□□ 2.61
PTCH2Q9Y6C5 WASH5P-204ENST00000632292 975 ntBASIC31.34■■■□□ 2.61
PTCH2Q9Y6C5 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
PTCH2Q9Y6C5 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC31.33■■■□□ 2.61
PTCH2Q9Y6C5 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
PTCH2Q9Y6C5 GDI1-215ENST00000630693 786 ntTSL 4 BASIC31.32■■■□□ 2.6
PTCH2Q9Y6C5 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
PTCH2Q9Y6C5 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
PTCH2Q9Y6C5 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
PTCH2Q9Y6C5 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
PTCH2Q9Y6C5 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC31.27■■■□□ 2.6
PTCH2Q9Y6C5 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC31.26■■■□□ 2.6
PTCH2Q9Y6C5 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC31.26■■■□□ 2.6
PTCH2Q9Y6C5 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
PTCH2Q9Y6C5 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC31.24■■■□□ 2.59
PTCH2Q9Y6C5 CIB2-204ENST00000557846 934 ntTSL 3 BASIC31.24■■■□□ 2.59
PTCH2Q9Y6C5 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC31.21■■■□□ 2.59
PTCH2Q9Y6C5 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
PTCH2Q9Y6C5 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
PTCH2Q9Y6C5 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
PTCH2Q9Y6C5 ABHD17AP3-201ENST00000503096 1137 ntBASIC31.18■■■□□ 2.58
PTCH2Q9Y6C5 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
PTCH2Q9Y6C5 CR559946.2-201ENST00000623684 991 ntBASIC31.17■■■□□ 2.58
PTCH2Q9Y6C5 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC31.16■■■□□ 2.58
PTCH2Q9Y6C5 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC31.16■■■□□ 2.58
PTCH2Q9Y6C5 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC31.15■■■□□ 2.58
PTCH2Q9Y6C5 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC31.15■■■□□ 2.58
PTCH2Q9Y6C5 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC31.13■■■□□ 2.57
PTCH2Q9Y6C5 DUX4L11-201ENST00000611504 1267 ntBASIC31.12■■■□□ 2.57
PTCH2Q9Y6C5 DUX4L12-201ENST00000614593 1267 ntBASIC31.12■■■□□ 2.57
PTCH2Q9Y6C5 DUX4L14-201ENST00000621227 1267 ntBASIC31.12■■■□□ 2.57
PTCH2Q9Y6C5 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
PTCH2Q9Y6C5 AGPS-202ENST00000409888 815 ntTSL 4 BASIC31.09■■■□□ 2.57
PTCH2Q9Y6C5 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC31.09■■■□□ 2.57
PTCH2Q9Y6C5 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
PTCH2Q9Y6C5 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
PTCH2Q9Y6C5 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC31.07■■■□□ 2.56
PTCH2Q9Y6C5 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC31.07■■■□□ 2.56
PTCH2Q9Y6C5 MIR6090-201ENST00000622481 60 ntBASIC31.07■■■□□ 2.56
PTCH2Q9Y6C5 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
PTCH2Q9Y6C5 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
PTCH2Q9Y6C5 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
PTCH2Q9Y6C5 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC31.06■■■□□ 2.56
PTCH2Q9Y6C5 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC31.05■■■□□ 2.56
PTCH2Q9Y6C5 LINC01971-201ENST00000617888 1048 ntBASIC31.05■■■□□ 2.56
PTCH2Q9Y6C5 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC31.05■■■□□ 2.56
PTCH2Q9Y6C5 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
PTCH2Q9Y6C5 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC31.04■■■□□ 2.56
PTCH2Q9Y6C5 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC31.04■■■□□ 2.56
PTCH2Q9Y6C5 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC31.04■■■□□ 2.56
PTCH2Q9Y6C5 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC31.03■■■□□ 2.56
PTCH2Q9Y6C5 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC31.03■■■□□ 2.56
PTCH2Q9Y6C5 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC31.03■■■□□ 2.56
PTCH2Q9Y6C5 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC31.01■■■□□ 2.56
PTCH2Q9Y6C5 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
PTCH2Q9Y6C5 AC108673.1-201ENST00000510422 1159 ntBASIC31.01■■■□□ 2.55
PTCH2Q9Y6C5 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms