Protein–RNA interactions for Protein: Q9NQ03

SCRT2, Transcriptional repressor scratch 2, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCRT2Q9NQ03 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC20.06■□□□□ 0.8
SCRT2Q9NQ03 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SCRT2Q9NQ03 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SCRT2Q9NQ03 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SCRT2Q9NQ03 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SCRT2Q9NQ03 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SCRT2Q9NQ03 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC20.04■□□□□ 0.8
SCRT2Q9NQ03 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SCRT2Q9NQ03 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SCRT2Q9NQ03 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SCRT2Q9NQ03 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SCRT2Q9NQ03 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
SCRT2Q9NQ03 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC20.02■□□□□ 0.79
SCRT2Q9NQ03 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SCRT2Q9NQ03 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SCRT2Q9NQ03 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
SCRT2Q9NQ03 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC20■□□□□ 0.79
SCRT2Q9NQ03 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SCRT2Q9NQ03 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC19.98■□□□□ 0.79
SCRT2Q9NQ03 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
SCRT2Q9NQ03 MVK-208ENST00000539696 608 ntTSL 5 BASIC19.96■□□□□ 0.79
SCRT2Q9NQ03 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
SCRT2Q9NQ03 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SCRT2Q9NQ03 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SCRT2Q9NQ03 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SCRT2Q9NQ03 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC19.93■□□□□ 0.78
SCRT2Q9NQ03 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SCRT2Q9NQ03 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SCRT2Q9NQ03 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC19.9■□□□□ 0.78
SCRT2Q9NQ03 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SCRT2Q9NQ03 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SCRT2Q9NQ03 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SCRT2Q9NQ03 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC19.87■□□□□ 0.77
SCRT2Q9NQ03 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC19.87■□□□□ 0.77
SCRT2Q9NQ03 AC135731.1-201ENST00000569415 2548 ntBASIC19.87■□□□□ 0.77
SCRT2Q9NQ03 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SCRT2Q9NQ03 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC19.87■□□□□ 0.77
SCRT2Q9NQ03 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SCRT2Q9NQ03 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
SCRT2Q9NQ03 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SCRT2Q9NQ03 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SCRT2Q9NQ03 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SCRT2Q9NQ03 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SCRT2Q9NQ03 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
SCRT2Q9NQ03 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SCRT2Q9NQ03 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SCRT2Q9NQ03 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC19.83■□□□□ 0.77
SCRT2Q9NQ03 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
SCRT2Q9NQ03 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SCRT2Q9NQ03 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC19.82■□□□□ 0.76
SCRT2Q9NQ03 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SCRT2Q9NQ03 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SCRT2Q9NQ03 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SCRT2Q9NQ03 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SCRT2Q9NQ03 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC19.81■□□□□ 0.76
SCRT2Q9NQ03 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SCRT2Q9NQ03 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SCRT2Q9NQ03 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
SCRT2Q9NQ03 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC19.8■□□□□ 0.76
SCRT2Q9NQ03 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SCRT2Q9NQ03 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
SCRT2Q9NQ03 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SCRT2Q9NQ03 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
SCRT2Q9NQ03 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SCRT2Q9NQ03 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SCRT2Q9NQ03 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
SCRT2Q9NQ03 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SCRT2Q9NQ03 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SCRT2Q9NQ03 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SCRT2Q9NQ03 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC19.76■□□□□ 0.75
SCRT2Q9NQ03 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SCRT2Q9NQ03 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC19.76■□□□□ 0.75
SCRT2Q9NQ03 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
SCRT2Q9NQ03 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SCRT2Q9NQ03 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
SCRT2Q9NQ03 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SCRT2Q9NQ03 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC19.75■□□□□ 0.75
SCRT2Q9NQ03 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SCRT2Q9NQ03 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCRT2Q9NQ03 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SCRT2Q9NQ03 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC19.74■□□□□ 0.75
SCRT2Q9NQ03 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SCRT2Q9NQ03 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
SCRT2Q9NQ03 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC19.73■□□□□ 0.75
SCRT2Q9NQ03 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC19.72■□□□□ 0.75
SCRT2Q9NQ03 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCRT2Q9NQ03 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCRT2Q9NQ03 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SCRT2Q9NQ03 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCRT2Q9NQ03 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCRT2Q9NQ03 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCRT2Q9NQ03 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SCRT2Q9NQ03 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SCRT2Q9NQ03 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SCRT2Q9NQ03 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SCRT2Q9NQ03 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SCRT2Q9NQ03 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SCRT2Q9NQ03 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC19.68■□□□□ 0.74
SCRT2Q9NQ03 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SCRT2Q9NQ03 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms