Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC30.54■■■□□ 2.48
UBE2OQ9C0C9 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC30.53■■■□□ 2.48
UBE2OQ9C0C9 HSD17B1P1-201ENST00000590052 955 ntBASIC30.53■■■□□ 2.48
UBE2OQ9C0C9 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC30.5■■■□□ 2.47
UBE2OQ9C0C9 DUX4L29-201ENST00000425409 679 ntBASIC30.49■■■□□ 2.47
UBE2OQ9C0C9 CALM3-209ENST00000597743 577 ntTSL 4 BASIC30.49■■■□□ 2.47
UBE2OQ9C0C9 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC30.47■■■□□ 2.47
UBE2OQ9C0C9 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
UBE2OQ9C0C9 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
UBE2OQ9C0C9 BRD4-212ENST00000630599 726 ntTSL 2 BASIC30.47■■■□□ 2.47
UBE2OQ9C0C9 DENR-202ENST00000455982 1052 ntTSL 5 BASIC30.45■■■□□ 2.47
UBE2OQ9C0C9 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC30.45■■■□□ 2.47
UBE2OQ9C0C9 MACF1-219ENST00000484793 834 ntTSL 2 BASIC30.44■■■□□ 2.46
UBE2OQ9C0C9 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
UBE2OQ9C0C9 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC30.43■■■□□ 2.46
UBE2OQ9C0C9 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
UBE2OQ9C0C9 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
UBE2OQ9C0C9 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
UBE2OQ9C0C9 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC30.37■■■□□ 2.45
UBE2OQ9C0C9 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
UBE2OQ9C0C9 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC30.36■■■□□ 2.45
UBE2OQ9C0C9 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC30.34■■■□□ 2.45
UBE2OQ9C0C9 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
UBE2OQ9C0C9 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.45
UBE2OQ9C0C9 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC30.32■■■□□ 2.44
UBE2OQ9C0C9 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
UBE2OQ9C0C9 RPS2-209ENST00000529806 993 ntTSL 3 BASIC30.32■■■□□ 2.44
UBE2OQ9C0C9 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC30.31■■■□□ 2.44
UBE2OQ9C0C9 AC016575.1-201ENST00000607026 382 ntBASIC30.31■■■□□ 2.44
UBE2OQ9C0C9 RNF166-209ENST00000567844 633 ntTSL 5 BASIC30.28■■■□□ 2.44
UBE2OQ9C0C9 MIR3648-2-201ENST00000581792 180 ntBASIC30.28■■■□□ 2.44
UBE2OQ9C0C9 MIR3648-1-201ENST00000615959 180 ntBASIC30.28■■■□□ 2.44
UBE2OQ9C0C9 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC30.28■■■□□ 2.44
UBE2OQ9C0C9 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC30.27■■■□□ 2.44
UBE2OQ9C0C9 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC30.26■■■□□ 2.43
UBE2OQ9C0C9 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
UBE2OQ9C0C9 AC021231.2-201ENST00000594613 730 ntBASIC30.26■■■□□ 2.43
UBE2OQ9C0C9 GDI1-215ENST00000630693 786 ntTSL 4 BASIC30.26■■■□□ 2.43
UBE2OQ9C0C9 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC30.25■■■□□ 2.43
UBE2OQ9C0C9 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC30.22■■■□□ 2.43
UBE2OQ9C0C9 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
UBE2OQ9C0C9 ABHD17AP3-201ENST00000503096 1137 ntBASIC30.21■■■□□ 2.43
UBE2OQ9C0C9 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC30.21■■■□□ 2.43
UBE2OQ9C0C9 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC30.19■■■□□ 2.42
UBE2OQ9C0C9 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
UBE2OQ9C0C9 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC30.17■■■□□ 2.42
UBE2OQ9C0C9 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC30.15■■■□□ 2.42
UBE2OQ9C0C9 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC30.15■■■□□ 2.42
UBE2OQ9C0C9 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
UBE2OQ9C0C9 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
UBE2OQ9C0C9 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC30.13■■■□□ 2.41
UBE2OQ9C0C9 CIB2-204ENST00000557846 934 ntTSL 3 BASIC30.13■■■□□ 2.41
UBE2OQ9C0C9 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
UBE2OQ9C0C9 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
UBE2OQ9C0C9 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
UBE2OQ9C0C9 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC30.1■■■□□ 2.41
UBE2OQ9C0C9 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC30.09■■■□□ 2.41
UBE2OQ9C0C9 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
UBE2OQ9C0C9 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
UBE2OQ9C0C9 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC30.08■■■□□ 2.41
UBE2OQ9C0C9 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
UBE2OQ9C0C9 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
UBE2OQ9C0C9 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
UBE2OQ9C0C9 AGPS-202ENST00000409888 815 ntTSL 4 BASIC30.06■■■□□ 2.4
UBE2OQ9C0C9 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC30.06■■■□□ 2.4
UBE2OQ9C0C9 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC30.05■■■□□ 2.4
UBE2OQ9C0C9 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC30.05■■■□□ 2.4
UBE2OQ9C0C9 CR559946.2-201ENST00000623684 991 ntBASIC30.05■■■□□ 2.4
UBE2OQ9C0C9 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
UBE2OQ9C0C9 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC30.04■■■□□ 2.4
UBE2OQ9C0C9 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC30.04■■■□□ 2.4
UBE2OQ9C0C9 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
UBE2OQ9C0C9 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
UBE2OQ9C0C9 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC30.03■■■□□ 2.4
UBE2OQ9C0C9 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC30.03■■■□□ 2.4
UBE2OQ9C0C9 DUX4L11-201ENST00000611504 1267 ntBASIC30.02■■■□□ 2.4
UBE2OQ9C0C9 DUX4L12-201ENST00000614593 1267 ntBASIC30.02■■■□□ 2.4
UBE2OQ9C0C9 DUX4L14-201ENST00000621227 1267 ntBASIC30.02■■■□□ 2.4
UBE2OQ9C0C9 WASH5P-204ENST00000632292 975 ntBASIC30.02■■■□□ 2.4
UBE2OQ9C0C9 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
UBE2OQ9C0C9 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC30.01■■■□□ 2.39
UBE2OQ9C0C9 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC30.01■■■□□ 2.39
UBE2OQ9C0C9 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC30■■■□□ 2.39
UBE2OQ9C0C9 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
UBE2OQ9C0C9 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
UBE2OQ9C0C9 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
UBE2OQ9C0C9 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC29.98■■■□□ 2.39
UBE2OQ9C0C9 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC29.97■■■□□ 2.39
UBE2OQ9C0C9 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC29.96■■■□□ 2.39
UBE2OQ9C0C9 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
UBE2OQ9C0C9 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC29.95■■■□□ 2.39
UBE2OQ9C0C9 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
UBE2OQ9C0C9 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC29.94■■■□□ 2.38
UBE2OQ9C0C9 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
UBE2OQ9C0C9 LINC01971-201ENST00000617888 1048 ntBASIC29.94■■■□□ 2.38
UBE2OQ9C0C9 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC29.93■■■□□ 2.38
UBE2OQ9C0C9 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC29.93■■■□□ 2.38
UBE2OQ9C0C9 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC29.93■■■□□ 2.38
UBE2OQ9C0C9 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
UBE2OQ9C0C9 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC29.92■■■□□ 2.38
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms