Protein–RNA interactions for Protein: Q9BYQ7

KRTAP4-1, Keratin-associated protein 4-1, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-1Q9BYQ7 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
KRTAP4-1Q9BYQ7 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC14.48□□□□□ -0.09
KRTAP4-1Q9BYQ7 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
KRTAP4-1Q9BYQ7 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC14.47□□□□□ -0.09
KRTAP4-1Q9BYQ7 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
KRTAP4-1Q9BYQ7 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
KRTAP4-1Q9BYQ7 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
KRTAP4-1Q9BYQ7 WASH5P-204ENST00000632292 975 ntBASIC14.46□□□□□ -0.09
KRTAP4-1Q9BYQ7 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC14.45□□□□□ -0.1
KRTAP4-1Q9BYQ7 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
KRTAP4-1Q9BYQ7 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
KRTAP4-1Q9BYQ7 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC14.45□□□□□ -0.1
KRTAP4-1Q9BYQ7 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC14.45□□□□□ -0.1
KRTAP4-1Q9BYQ7 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC14.45□□□□□ -0.1
KRTAP4-1Q9BYQ7 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC14.45□□□□□ -0.1
KRTAP4-1Q9BYQ7 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
KRTAP4-1Q9BYQ7 BOD1-206ENST00000480951 814 ntTSL 2 BASIC14.44□□□□□ -0.1
KRTAP4-1Q9BYQ7 HGH1-207ENST00000628266 258 ntTSL 5 BASIC14.44□□□□□ -0.1
KRTAP4-1Q9BYQ7 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
KRTAP4-1Q9BYQ7 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
KRTAP4-1Q9BYQ7 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
KRTAP4-1Q9BYQ7 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC14.42□□□□□ -0.1
KRTAP4-1Q9BYQ7 RPS2-202ENST00000526522 924 ntTSL 2 BASIC14.42□□□□□ -0.1
KRTAP4-1Q9BYQ7 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
KRTAP4-1Q9BYQ7 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
KRTAP4-1Q9BYQ7 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC14.41□□□□□ -0.1
KRTAP4-1Q9BYQ7 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
KRTAP4-1Q9BYQ7 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
KRTAP4-1Q9BYQ7 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC14.4□□□□□ -0.1
KRTAP4-1Q9BYQ7 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
KRTAP4-1Q9BYQ7 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC14.4□□□□□ -0.1
KRTAP4-1Q9BYQ7 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KRTAP4-1Q9BYQ7 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC14.39□□□□□ -0.11
KRTAP4-1Q9BYQ7 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KRTAP4-1Q9BYQ7 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
KRTAP4-1Q9BYQ7 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
KRTAP4-1Q9BYQ7 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
KRTAP4-1Q9BYQ7 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
KRTAP4-1Q9BYQ7 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
KRTAP4-1Q9BYQ7 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC14.35□□□□□ -0.11
KRTAP4-1Q9BYQ7 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC14.35□□□□□ -0.11
KRTAP4-1Q9BYQ7 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC14.35□□□□□ -0.11
KRTAP4-1Q9BYQ7 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
KRTAP4-1Q9BYQ7 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC14.35□□□□□ -0.11
KRTAP4-1Q9BYQ7 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC14.34□□□□□ -0.11
KRTAP4-1Q9BYQ7 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC14.34□□□□□ -0.11
KRTAP4-1Q9BYQ7 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
KRTAP4-1Q9BYQ7 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
KRTAP4-1Q9BYQ7 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
KRTAP4-1Q9BYQ7 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
KRTAP4-1Q9BYQ7 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
KRTAP4-1Q9BYQ7 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
KRTAP4-1Q9BYQ7 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
KRTAP4-1Q9BYQ7 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
KRTAP4-1Q9BYQ7 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
KRTAP4-1Q9BYQ7 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
KRTAP4-1Q9BYQ7 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
KRTAP4-1Q9BYQ7 RPS2-209ENST00000529806 993 ntTSL 3 BASIC14.32□□□□□ -0.12
KRTAP4-1Q9BYQ7 AC021231.2-201ENST00000594613 730 ntBASIC14.32□□□□□ -0.12
KRTAP4-1Q9BYQ7 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
KRTAP4-1Q9BYQ7 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
KRTAP4-1Q9BYQ7 DUX4L29-201ENST00000425409 679 ntBASIC14.31□□□□□ -0.12
KRTAP4-1Q9BYQ7 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
KRTAP4-1Q9BYQ7 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
KRTAP4-1Q9BYQ7 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
KRTAP4-1Q9BYQ7 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
KRTAP4-1Q9BYQ7 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
KRTAP4-1Q9BYQ7 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC14.29□□□□□ -0.12
KRTAP4-1Q9BYQ7 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
KRTAP4-1Q9BYQ7 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
KRTAP4-1Q9BYQ7 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
KRTAP4-1Q9BYQ7 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
KRTAP4-1Q9BYQ7 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC14.27□□□□□ -0.13
KRTAP4-1Q9BYQ7 MIR6090-201ENST00000622481 60 ntBASIC14.27□□□□□ -0.13
KRTAP4-1Q9BYQ7 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
KRTAP4-1Q9BYQ7 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
KRTAP4-1Q9BYQ7 MIR4449-201ENST00000578365 66 ntBASIC14.26□□□□□ -0.13
KRTAP4-1Q9BYQ7 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC14.26□□□□□ -0.13
KRTAP4-1Q9BYQ7 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC14.24□□□□□ -0.13
KRTAP4-1Q9BYQ7 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC14.23□□□□□ -0.13
KRTAP4-1Q9BYQ7 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
KRTAP4-1Q9BYQ7 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
KRTAP4-1Q9BYQ7 MIR639-201ENST00000384974 98 ntBASIC14.23□□□□□ -0.13
KRTAP4-1Q9BYQ7 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
KRTAP4-1Q9BYQ7 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
KRTAP4-1Q9BYQ7 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC14.22□□□□□ -0.13
KRTAP4-1Q9BYQ7 CIB2-204ENST00000557846 934 ntTSL 3 BASIC14.22□□□□□ -0.13
KRTAP4-1Q9BYQ7 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
KRTAP4-1Q9BYQ7 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
KRTAP4-1Q9BYQ7 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
KRTAP4-1Q9BYQ7 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC14.21□□□□□ -0.13
KRTAP4-1Q9BYQ7 AC016575.1-201ENST00000607026 382 ntBASIC14.21□□□□□ -0.13
KRTAP4-1Q9BYQ7 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
KRTAP4-1Q9BYQ7 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.14
KRTAP4-1Q9BYQ7 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
KRTAP4-1Q9BYQ7 MACF1-219ENST00000484793 834 ntTSL 2 BASIC14.2□□□□□ -0.14
KRTAP4-1Q9BYQ7 RNF166-209ENST00000567844 633 ntTSL 5 BASIC14.2□□□□□ -0.14
KRTAP4-1Q9BYQ7 MIR3648-2-201ENST00000581792 180 ntBASIC14.2□□□□□ -0.14
KRTAP4-1Q9BYQ7 MIR3648-1-201ENST00000615959 180 ntBASIC14.2□□□□□ -0.14
KRTAP4-1Q9BYQ7 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms