Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC32.21■■■□□ 2.75
DDX11Q96FC9 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC32.2■■■□□ 2.75
DDX11Q96FC9 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
DDX11Q96FC9 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
DDX11Q96FC9 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC32.19■■■□□ 2.74
DDX11Q96FC9 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC32.19■■■□□ 2.74
DDX11Q96FC9 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC32.19■■■□□ 2.74
DDX11Q96FC9 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC32.18■■■□□ 2.74
DDX11Q96FC9 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC32.18■■■□□ 2.74
DDX11Q96FC9 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
DDX11Q96FC9 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
DDX11Q96FC9 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
DDX11Q96FC9 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
DDX11Q96FC9 RPS2P35-201ENST00000443417 897 ntBASIC32.15■■■□□ 2.74
DDX11Q96FC9 CAHM-201ENST00000604200 896 ntBASIC32.15■■■□□ 2.74
DDX11Q96FC9 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
DDX11Q96FC9 AC120057.4-201ENST00000624722 1615 ntBASIC32.15■■■□□ 2.74
DDX11Q96FC9 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
DDX11Q96FC9 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
DDX11Q96FC9 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC32.13■■■□□ 2.73
DDX11Q96FC9 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
DDX11Q96FC9 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
DDX11Q96FC9 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC32.09■■■□□ 2.73
DDX11Q96FC9 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC32.09■■■□□ 2.73
DDX11Q96FC9 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC32.09■■■□□ 2.73
DDX11Q96FC9 AL133380.1-201ENST00000506013 324 ntBASIC32.08■■■□□ 2.73
DDX11Q96FC9 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
DDX11Q96FC9 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC32.05■■■□□ 2.72
DDX11Q96FC9 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
DDX11Q96FC9 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC32.03■■■□□ 2.72
DDX11Q96FC9 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC32.03■■■□□ 2.72
DDX11Q96FC9 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
DDX11Q96FC9 AL391121.1-201ENST00000607967 1349 ntBASIC32.02■■■□□ 2.72
DDX11Q96FC9 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
DDX11Q96FC9 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
DDX11Q96FC9 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC32■■■□□ 2.71
DDX11Q96FC9 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
DDX11Q96FC9 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC32■■■□□ 2.71
DDX11Q96FC9 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC32■■■□□ 2.71
DDX11Q96FC9 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC31.99■■■□□ 2.71
DDX11Q96FC9 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
DDX11Q96FC9 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
DDX11Q96FC9 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC31.96■■■□□ 2.71
DDX11Q96FC9 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC31.94■■■□□ 2.7
DDX11Q96FC9 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC31.94■■■□□ 2.7
DDX11Q96FC9 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC31.92■■■□□ 2.7
DDX11Q96FC9 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC31.91■■■□□ 2.7
DDX11Q96FC9 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC31.89■■■□□ 2.7
DDX11Q96FC9 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
DDX11Q96FC9 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
DDX11Q96FC9 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC31.87■■■□□ 2.69
DDX11Q96FC9 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
DDX11Q96FC9 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
DDX11Q96FC9 AP006261.1-201ENST00000584783 668 ntBASIC31.86■■■□□ 2.69
DDX11Q96FC9 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC31.86■■■□□ 2.69
DDX11Q96FC9 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
DDX11Q96FC9 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
DDX11Q96FC9 AL162393.1-201ENST00000437852 946 ntBASIC31.85■■■□□ 2.69
DDX11Q96FC9 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC31.84■■■□□ 2.69
DDX11Q96FC9 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
DDX11Q96FC9 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC31.84■■■□□ 2.69
DDX11Q96FC9 EBPL-202ENST00000378268 680 ntTSL 3 BASIC31.83■■■□□ 2.69
DDX11Q96FC9 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC31.82■■■□□ 2.68
DDX11Q96FC9 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
DDX11Q96FC9 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
DDX11Q96FC9 NRG1-221ENST00000614767 762 ntTSL 5 BASIC31.8■■■□□ 2.68
DDX11Q96FC9 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
DDX11Q96FC9 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
DDX11Q96FC9 HNRNPLP2-201ENST00000568980 1570 ntBASIC31.77■■■□□ 2.68
DDX11Q96FC9 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC31.77■■■□□ 2.68
DDX11Q96FC9 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
DDX11Q96FC9 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
DDX11Q96FC9 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
DDX11Q96FC9 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
DDX11Q96FC9 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC31.75■■■□□ 2.67
DDX11Q96FC9 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
DDX11Q96FC9 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
DDX11Q96FC9 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
DDX11Q96FC9 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC31.74■■■□□ 2.67
DDX11Q96FC9 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
DDX11Q96FC9 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC31.71■■■□□ 2.67
DDX11Q96FC9 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
DDX11Q96FC9 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
DDX11Q96FC9 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC31.68■■■□□ 2.66
DDX11Q96FC9 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC31.67■■■□□ 2.66
DDX11Q96FC9 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
DDX11Q96FC9 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
DDX11Q96FC9 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC31.66■■■□□ 2.66
DDX11Q96FC9 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC31.64■■■□□ 2.66
DDX11Q96FC9 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC31.64■■■□□ 2.66
DDX11Q96FC9 MIR3665-201ENST00000578708 105 ntBASIC31.64■■■□□ 2.66
DDX11Q96FC9 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC31.64■■■□□ 2.66
DDX11Q96FC9 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC31.62■■■□□ 2.65
DDX11Q96FC9 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
DDX11Q96FC9 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC31.61■■■□□ 2.65
DDX11Q96FC9 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC31.6■■■□□ 2.65
DDX11Q96FC9 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
DDX11Q96FC9 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
DDX11Q96FC9 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
DDX11Q96FC9 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms