Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC24.89■■□□□ 1.58
LSMEM1Q8N8F7 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC24.89■■□□□ 1.58
LSMEM1Q8N8F7 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC24.89■■□□□ 1.57
LSMEM1Q8N8F7 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC24.89■■□□□ 1.57
LSMEM1Q8N8F7 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
LSMEM1Q8N8F7 AC139426.1-201ENST00000568218 2529 ntBASIC24.87■■□□□ 1.57
LSMEM1Q8N8F7 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
LSMEM1Q8N8F7 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC24.87■■□□□ 1.57
LSMEM1Q8N8F7 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
LSMEM1Q8N8F7 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
LSMEM1Q8N8F7 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC24.86■■□□□ 1.57
LSMEM1Q8N8F7 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC24.84■■□□□ 1.57
LSMEM1Q8N8F7 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
LSMEM1Q8N8F7 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
LSMEM1Q8N8F7 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
LSMEM1Q8N8F7 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
LSMEM1Q8N8F7 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
LSMEM1Q8N8F7 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC24.75■■□□□ 1.55
LSMEM1Q8N8F7 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC24.75■■□□□ 1.55
LSMEM1Q8N8F7 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
LSMEM1Q8N8F7 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC24.74■■□□□ 1.55
LSMEM1Q8N8F7 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
LSMEM1Q8N8F7 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC24.73■■□□□ 1.55
LSMEM1Q8N8F7 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC24.72■■□□□ 1.55
LSMEM1Q8N8F7 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC24.72■■□□□ 1.55
LSMEM1Q8N8F7 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
LSMEM1Q8N8F7 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC24.71■■□□□ 1.55
LSMEM1Q8N8F7 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC24.71■■□□□ 1.55
LSMEM1Q8N8F7 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
LSMEM1Q8N8F7 KLF16-203ENST00000592313 508 ntTSL 3 BASIC24.7■■□□□ 1.54
LSMEM1Q8N8F7 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
LSMEM1Q8N8F7 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC24.68■■□□□ 1.54
LSMEM1Q8N8F7 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC24.68■■□□□ 1.54
LSMEM1Q8N8F7 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
LSMEM1Q8N8F7 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
LSMEM1Q8N8F7 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC24.64■■□□□ 1.54
LSMEM1Q8N8F7 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
LSMEM1Q8N8F7 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC24.63■■□□□ 1.53
LSMEM1Q8N8F7 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC24.61■■□□□ 1.53
LSMEM1Q8N8F7 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.53
LSMEM1Q8N8F7 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
LSMEM1Q8N8F7 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC24.61■■□□□ 1.53
LSMEM1Q8N8F7 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
LSMEM1Q8N8F7 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC24.6■■□□□ 1.53
LSMEM1Q8N8F7 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
LSMEM1Q8N8F7 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
LSMEM1Q8N8F7 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC24.58■■□□□ 1.52
LSMEM1Q8N8F7 AL133380.1-201ENST00000506013 324 ntBASIC24.57■■□□□ 1.52
LSMEM1Q8N8F7 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC24.57■■□□□ 1.52
LSMEM1Q8N8F7 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
LSMEM1Q8N8F7 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
LSMEM1Q8N8F7 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC24.55■■□□□ 1.52
LSMEM1Q8N8F7 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC24.55■■□□□ 1.52
LSMEM1Q8N8F7 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
LSMEM1Q8N8F7 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
LSMEM1Q8N8F7 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
LSMEM1Q8N8F7 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
LSMEM1Q8N8F7 ABCB10P1-201ENST00000614297 2181 ntBASIC24.54■■□□□ 1.52
LSMEM1Q8N8F7 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
LSMEM1Q8N8F7 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
LSMEM1Q8N8F7 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC24.53■■□□□ 1.52
LSMEM1Q8N8F7 WASH5P-204ENST00000632292 975 ntBASIC24.53■■□□□ 1.52
LSMEM1Q8N8F7 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
LSMEM1Q8N8F7 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
LSMEM1Q8N8F7 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
LSMEM1Q8N8F7 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
LSMEM1Q8N8F7 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC24.5■■□□□ 1.51
LSMEM1Q8N8F7 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
LSMEM1Q8N8F7 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC24.47■■□□□ 1.51
LSMEM1Q8N8F7 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC24.47■■□□□ 1.51
LSMEM1Q8N8F7 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
LSMEM1Q8N8F7 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
LSMEM1Q8N8F7 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC24.45■■□□□ 1.5
LSMEM1Q8N8F7 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.5
LSMEM1Q8N8F7 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
LSMEM1Q8N8F7 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
LSMEM1Q8N8F7 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
LSMEM1Q8N8F7 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
LSMEM1Q8N8F7 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
LSMEM1Q8N8F7 RARRES2P7-201ENST00000567349 469 ntBASIC24.43■■□□□ 1.5
LSMEM1Q8N8F7 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
LSMEM1Q8N8F7 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC24.42■■□□□ 1.5
LSMEM1Q8N8F7 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
LSMEM1Q8N8F7 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
LSMEM1Q8N8F7 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
LSMEM1Q8N8F7 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
LSMEM1Q8N8F7 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
LSMEM1Q8N8F7 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
LSMEM1Q8N8F7 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC24.4■■□□□ 1.5
LSMEM1Q8N8F7 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC24.39■■□□□ 1.5
LSMEM1Q8N8F7 ST7-AS1-201ENST00000456775 1889 ntBASIC24.39■■□□□ 1.5
LSMEM1Q8N8F7 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC24.39■■□□□ 1.49
LSMEM1Q8N8F7 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
LSMEM1Q8N8F7 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
LSMEM1Q8N8F7 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
LSMEM1Q8N8F7 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
LSMEM1Q8N8F7 SETD8P1-201ENST00000623146 1180 ntBASIC24.37■■□□□ 1.49
LSMEM1Q8N8F7 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
LSMEM1Q8N8F7 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
LSMEM1Q8N8F7 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms