Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 AL133380.1-201ENST00000506013 324 ntBASIC30.16■■■□□ 2.42
CCDC65Q8IXS2 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC30.16■■■□□ 2.42
CCDC65Q8IXS2 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
CCDC65Q8IXS2 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
CCDC65Q8IXS2 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
CCDC65Q8IXS2 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
CCDC65Q8IXS2 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC30.12■■■□□ 2.41
CCDC65Q8IXS2 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
CCDC65Q8IXS2 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC30.1■■■□□ 2.41
CCDC65Q8IXS2 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC30.1■■■□□ 2.41
CCDC65Q8IXS2 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
CCDC65Q8IXS2 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
CCDC65Q8IXS2 SETD8P1-201ENST00000623146 1180 ntBASIC30.08■■■□□ 2.41
CCDC65Q8IXS2 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC30.08■■■□□ 2.41
CCDC65Q8IXS2 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
CCDC65Q8IXS2 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC30.05■■■□□ 2.4
CCDC65Q8IXS2 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
CCDC65Q8IXS2 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC30.05■■■□□ 2.4
CCDC65Q8IXS2 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
CCDC65Q8IXS2 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
CCDC65Q8IXS2 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
CCDC65Q8IXS2 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC30.02■■■□□ 2.4
CCDC65Q8IXS2 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
CCDC65Q8IXS2 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
CCDC65Q8IXS2 WASH5P-204ENST00000632292 975 ntBASIC30■■■□□ 2.39
CCDC65Q8IXS2 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC30■■■□□ 2.39
CCDC65Q8IXS2 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
CCDC65Q8IXS2 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
CCDC65Q8IXS2 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC29.98■■■□□ 2.39
CCDC65Q8IXS2 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
CCDC65Q8IXS2 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC29.97■■■□□ 2.39
CCDC65Q8IXS2 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC29.97■■■□□ 2.39
CCDC65Q8IXS2 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC29.96■■■□□ 2.39
CCDC65Q8IXS2 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
CCDC65Q8IXS2 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
CCDC65Q8IXS2 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
CCDC65Q8IXS2 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC29.93■■■□□ 2.38
CCDC65Q8IXS2 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC29.91■■■□□ 2.38
CCDC65Q8IXS2 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
CCDC65Q8IXS2 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
CCDC65Q8IXS2 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
CCDC65Q8IXS2 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC29.89■■■□□ 2.38
CCDC65Q8IXS2 AL161658.1-201ENST00000623641 1967 ntBASIC29.89■■■□□ 2.38
CCDC65Q8IXS2 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC29.87■■■□□ 2.37
CCDC65Q8IXS2 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC29.86■■■□□ 2.37
CCDC65Q8IXS2 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC29.86■■■□□ 2.37
CCDC65Q8IXS2 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
CCDC65Q8IXS2 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC29.85■■■□□ 2.37
CCDC65Q8IXS2 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC29.85■■■□□ 2.37
CCDC65Q8IXS2 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
CCDC65Q8IXS2 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
CCDC65Q8IXS2 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC29.83■■■□□ 2.37
CCDC65Q8IXS2 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
CCDC65Q8IXS2 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
CCDC65Q8IXS2 AC097358.2-201ENST00000607541 1159 ntBASIC29.83■■■□□ 2.37
CCDC65Q8IXS2 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
CCDC65Q8IXS2 AC136428.2-201ENST00000563187 214 ntBASIC29.81■■■□□ 2.36
CCDC65Q8IXS2 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
CCDC65Q8IXS2 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
CCDC65Q8IXS2 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
CCDC65Q8IXS2 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
CCDC65Q8IXS2 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC29.76■■■□□ 2.36
CCDC65Q8IXS2 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC29.76■■■□□ 2.35
CCDC65Q8IXS2 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
CCDC65Q8IXS2 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
CCDC65Q8IXS2 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
CCDC65Q8IXS2 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC29.75■■■□□ 2.35
CCDC65Q8IXS2 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC29.75■■■□□ 2.35
CCDC65Q8IXS2 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC29.75■■■□□ 2.35
CCDC65Q8IXS2 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
CCDC65Q8IXS2 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
CCDC65Q8IXS2 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC29.74■■■□□ 2.35
CCDC65Q8IXS2 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC29.73■■■□□ 2.35
CCDC65Q8IXS2 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC29.73■■■□□ 2.35
CCDC65Q8IXS2 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
CCDC65Q8IXS2 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
CCDC65Q8IXS2 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
CCDC65Q8IXS2 AL391121.1-201ENST00000607967 1349 ntBASIC29.71■■■□□ 2.35
CCDC65Q8IXS2 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC29.71■■■□□ 2.35
CCDC65Q8IXS2 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC29.71■■■□□ 2.35
CCDC65Q8IXS2 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC29.7■■■□□ 2.35
CCDC65Q8IXS2 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC29.7■■■□□ 2.35
CCDC65Q8IXS2 CAHM-201ENST00000604200 896 ntBASIC29.7■■■□□ 2.35
CCDC65Q8IXS2 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC29.7■■■□□ 2.34
CCDC65Q8IXS2 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC29.69■■■□□ 2.34
CCDC65Q8IXS2 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC29.69■■■□□ 2.34
CCDC65Q8IXS2 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
CCDC65Q8IXS2 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC29.68■■■□□ 2.34
CCDC65Q8IXS2 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
CCDC65Q8IXS2 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC29.68■■■□□ 2.34
CCDC65Q8IXS2 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC29.67■■■□□ 2.34
CCDC65Q8IXS2 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC29.67■■■□□ 2.34
CCDC65Q8IXS2 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
CCDC65Q8IXS2 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
CCDC65Q8IXS2 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC29.66■■■□□ 2.34
CCDC65Q8IXS2 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
CCDC65Q8IXS2 EBPL-202ENST00000378268 680 ntTSL 3 BASIC29.66■■■□□ 2.34
CCDC65Q8IXS2 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
CCDC65Q8IXS2 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC29.65■■■□□ 2.34
CCDC65Q8IXS2 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC29.65■■■□□ 2.34
Retrieved 100 of 98,524 protein–RNA pairs in 9.4 ms