Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC28.97■■■□□ 2.23
RNF135Q8IUD6 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
RNF135Q8IUD6 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC28.97■■■□□ 2.23
RNF135Q8IUD6 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC28.96■■■□□ 2.23
RNF135Q8IUD6 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
RNF135Q8IUD6 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC28.94■■■□□ 2.22
RNF135Q8IUD6 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
RNF135Q8IUD6 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC28.92■■■□□ 2.22
RNF135Q8IUD6 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
RNF135Q8IUD6 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
RNF135Q8IUD6 RPS2-202ENST00000526522 924 ntTSL 2 BASIC28.92■■■□□ 2.22
RNF135Q8IUD6 HGH1-207ENST00000628266 258 ntTSL 5 BASIC28.92■■■□□ 2.22
RNF135Q8IUD6 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
RNF135Q8IUD6 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
RNF135Q8IUD6 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC28.89■■■□□ 2.22
RNF135Q8IUD6 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC28.89■■■□□ 2.22
RNF135Q8IUD6 MIR4449-201ENST00000578365 66 ntBASIC28.89■■■□□ 2.22
RNF135Q8IUD6 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC28.89■■■□□ 2.22
RNF135Q8IUD6 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
RNF135Q8IUD6 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
RNF135Q8IUD6 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
RNF135Q8IUD6 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC28.83■■■□□ 2.21
RNF135Q8IUD6 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC28.82■■■□□ 2.2
RNF135Q8IUD6 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC28.82■■■□□ 2.2
RNF135Q8IUD6 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC28.82■■■□□ 2.2
RNF135Q8IUD6 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC28.81■■■□□ 2.2
RNF135Q8IUD6 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC28.8■■■□□ 2.2
RNF135Q8IUD6 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
RNF135Q8IUD6 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC28.79■■■□□ 2.2
RNF135Q8IUD6 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
RNF135Q8IUD6 DENR-202ENST00000455982 1052 ntTSL 5 BASIC28.76■■■□□ 2.19
RNF135Q8IUD6 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
RNF135Q8IUD6 MIR639-201ENST00000384974 98 ntBASIC28.75■■■□□ 2.19
RNF135Q8IUD6 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC28.75■■■□□ 2.19
RNF135Q8IUD6 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC28.74■■■□□ 2.19
RNF135Q8IUD6 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
RNF135Q8IUD6 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
RNF135Q8IUD6 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
RNF135Q8IUD6 DUX4L29-201ENST00000425409 679 ntBASIC28.7■■■□□ 2.18
RNF135Q8IUD6 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC28.69■■■□□ 2.18
RNF135Q8IUD6 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
RNF135Q8IUD6 HSD17B1P1-201ENST00000590052 955 ntBASIC28.65■■■□□ 2.18
RNF135Q8IUD6 MACF1-219ENST00000484793 834 ntTSL 2 BASIC28.64■■■□□ 2.18
RNF135Q8IUD6 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
RNF135Q8IUD6 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
RNF135Q8IUD6 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC28.63■■■□□ 2.17
RNF135Q8IUD6 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC28.63■■■□□ 2.17
RNF135Q8IUD6 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC28.63■■■□□ 2.17
RNF135Q8IUD6 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
RNF135Q8IUD6 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
RNF135Q8IUD6 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
RNF135Q8IUD6 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
RNF135Q8IUD6 CALM3-209ENST00000597743 577 ntTSL 4 BASIC28.62■■■□□ 2.17
RNF135Q8IUD6 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
RNF135Q8IUD6 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC28.61■■■□□ 2.17
RNF135Q8IUD6 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC28.6■■■□□ 2.17
RNF135Q8IUD6 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC28.59■■■□□ 2.17
RNF135Q8IUD6 RPS2-209ENST00000529806 993 ntTSL 3 BASIC28.57■■■□□ 2.16
RNF135Q8IUD6 BRD4-212ENST00000630599 726 ntTSL 2 BASIC28.57■■■□□ 2.16
RNF135Q8IUD6 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC28.57■■■□□ 2.16
RNF135Q8IUD6 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
RNF135Q8IUD6 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC28.56■■■□□ 2.16
RNF135Q8IUD6 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
RNF135Q8IUD6 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
RNF135Q8IUD6 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
RNF135Q8IUD6 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC28.54■■■□□ 2.16
RNF135Q8IUD6 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
RNF135Q8IUD6 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC28.53■■■□□ 2.16
RNF135Q8IUD6 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
RNF135Q8IUD6 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC28.53■■■□□ 2.16
RNF135Q8IUD6 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
RNF135Q8IUD6 AC021231.2-201ENST00000594613 730 ntBASIC28.52■■■□□ 2.16
RNF135Q8IUD6 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
RNF135Q8IUD6 AC016575.1-201ENST00000607026 382 ntBASIC28.51■■■□□ 2.15
RNF135Q8IUD6 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
RNF135Q8IUD6 MIR3648-2-201ENST00000581792 180 ntBASIC28.5■■■□□ 2.15
RNF135Q8IUD6 MIR3648-1-201ENST00000615959 180 ntBASIC28.5■■■□□ 2.15
RNF135Q8IUD6 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
RNF135Q8IUD6 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC28.49■■■□□ 2.15
RNF135Q8IUD6 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC28.49■■■□□ 2.15
RNF135Q8IUD6 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC28.48■■■□□ 2.15
RNF135Q8IUD6 RNF166-209ENST00000567844 633 ntTSL 5 BASIC28.48■■■□□ 2.15
RNF135Q8IUD6 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
RNF135Q8IUD6 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC28.47■■■□□ 2.15
RNF135Q8IUD6 GDI1-215ENST00000630693 786 ntTSL 4 BASIC28.47■■■□□ 2.15
RNF135Q8IUD6 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
RNF135Q8IUD6 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
RNF135Q8IUD6 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC28.44■■■□□ 2.14
RNF135Q8IUD6 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC28.44■■■□□ 2.14
RNF135Q8IUD6 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
RNF135Q8IUD6 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC28.43■■■□□ 2.14
RNF135Q8IUD6 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
RNF135Q8IUD6 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
RNF135Q8IUD6 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
RNF135Q8IUD6 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC28.41■■■□□ 2.14
RNF135Q8IUD6 WASH5P-204ENST00000632292 975 ntBASIC28.41■■■□□ 2.14
RNF135Q8IUD6 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
RNF135Q8IUD6 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
RNF135Q8IUD6 CIB2-204ENST00000557846 934 ntTSL 3 BASIC28.38■■■□□ 2.13
RNF135Q8IUD6 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms