Protein–RNA interactions for Protein: Q6ZUF6

LINC00336, Putative uncharacterized protein encoded by LINC00336, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00336Q6ZUF6 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LINC00336Q6ZUF6 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LINC00336Q6ZUF6 DUX4L29-201ENST00000425409 679 ntBASIC18.37■□□□□ 0.53
LINC00336Q6ZUF6 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LINC00336Q6ZUF6 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LINC00336Q6ZUF6 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LINC00336Q6ZUF6 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LINC00336Q6ZUF6 RPS2-209ENST00000529806 993 ntTSL 3 BASIC18.36■□□□□ 0.53
LINC00336Q6ZUF6 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LINC00336Q6ZUF6 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LINC00336Q6ZUF6 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC18.35■□□□□ 0.53
LINC00336Q6ZUF6 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC18.35■□□□□ 0.53
LINC00336Q6ZUF6 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC18.34■□□□□ 0.53
LINC00336Q6ZUF6 MIR639-201ENST00000384974 98 ntBASIC18.34■□□□□ 0.53
LINC00336Q6ZUF6 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
LINC00336Q6ZUF6 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
LINC00336Q6ZUF6 MACF1-219ENST00000484793 834 ntTSL 2 BASIC18.33■□□□□ 0.52
LINC00336Q6ZUF6 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LINC00336Q6ZUF6 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LINC00336Q6ZUF6 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
LINC00336Q6ZUF6 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
LINC00336Q6ZUF6 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC18.29■□□□□ 0.52
LINC00336Q6ZUF6 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LINC00336Q6ZUF6 RPS2-202ENST00000526522 924 ntTSL 2 BASIC18.29■□□□□ 0.52
LINC00336Q6ZUF6 CALM3-209ENST00000597743 577 ntTSL 4 BASIC18.29■□□□□ 0.52
LINC00336Q6ZUF6 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC18.29■□□□□ 0.52
LINC00336Q6ZUF6 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LINC00336Q6ZUF6 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LINC00336Q6ZUF6 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LINC00336Q6ZUF6 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LINC00336Q6ZUF6 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LINC00336Q6ZUF6 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC18.24■□□□□ 0.51
LINC00336Q6ZUF6 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LINC00336Q6ZUF6 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LINC00336Q6ZUF6 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LINC00336Q6ZUF6 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC18.22■□□□□ 0.51
LINC00336Q6ZUF6 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LINC00336Q6ZUF6 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LINC00336Q6ZUF6 WASH5P-204ENST00000632292 975 ntBASIC18.21■□□□□ 0.51
LINC00336Q6ZUF6 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC18.21■□□□□ 0.51
LINC00336Q6ZUF6 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
LINC00336Q6ZUF6 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
LINC00336Q6ZUF6 HSD17B1P1-201ENST00000590052 955 ntBASIC18.2■□□□□ 0.5
LINC00336Q6ZUF6 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LINC00336Q6ZUF6 AGPS-202ENST00000409888 815 ntTSL 4 BASIC18.19■□□□□ 0.5
LINC00336Q6ZUF6 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC18.19■□□□□ 0.5
LINC00336Q6ZUF6 CIB2-204ENST00000557846 934 ntTSL 3 BASIC18.19■□□□□ 0.5
LINC00336Q6ZUF6 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC18.18■□□□□ 0.5
LINC00336Q6ZUF6 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LINC00336Q6ZUF6 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC18.18■□□□□ 0.5
LINC00336Q6ZUF6 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
LINC00336Q6ZUF6 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC18.18■□□□□ 0.5
LINC00336Q6ZUF6 RNF166-209ENST00000567844 633 ntTSL 5 BASIC18.18■□□□□ 0.5
LINC00336Q6ZUF6 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC18.17■□□□□ 0.5
LINC00336Q6ZUF6 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC18.17■□□□□ 0.5
LINC00336Q6ZUF6 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LINC00336Q6ZUF6 AC021231.2-201ENST00000594613 730 ntBASIC18.17■□□□□ 0.5
LINC00336Q6ZUF6 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LINC00336Q6ZUF6 MIR3648-2-201ENST00000581792 180 ntBASIC18.16■□□□□ 0.5
LINC00336Q6ZUF6 MIR3648-1-201ENST00000615959 180 ntBASIC18.16■□□□□ 0.5
LINC00336Q6ZUF6 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC18.16■□□□□ 0.5
LINC00336Q6ZUF6 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LINC00336Q6ZUF6 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LINC00336Q6ZUF6 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LINC00336Q6ZUF6 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LINC00336Q6ZUF6 GDI1-215ENST00000630693 786 ntTSL 4 BASIC18.15■□□□□ 0.5
LINC00336Q6ZUF6 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
LINC00336Q6ZUF6 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LINC00336Q6ZUF6 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LINC00336Q6ZUF6 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC18.14■□□□□ 0.49
LINC00336Q6ZUF6 BRD4-212ENST00000630599 726 ntTSL 2 BASIC18.14■□□□□ 0.49
LINC00336Q6ZUF6 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LINC00336Q6ZUF6 AC016575.1-201ENST00000607026 382 ntBASIC18.13■□□□□ 0.49
LINC00336Q6ZUF6 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC18.13■□□□□ 0.49
LINC00336Q6ZUF6 AC108673.1-201ENST00000510422 1159 ntBASIC18.11■□□□□ 0.49
LINC00336Q6ZUF6 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC18.11■□□□□ 0.49
LINC00336Q6ZUF6 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LINC00336Q6ZUF6 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC18.11■□□□□ 0.49
LINC00336Q6ZUF6 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
LINC00336Q6ZUF6 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
LINC00336Q6ZUF6 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
LINC00336Q6ZUF6 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
LINC00336Q6ZUF6 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC18.08■□□□□ 0.48
LINC00336Q6ZUF6 LINC01971-201ENST00000617888 1048 ntBASIC18.08■□□□□ 0.48
LINC00336Q6ZUF6 AL161658.1-201ENST00000623641 1967 ntBASIC18.08■□□□□ 0.48
LINC00336Q6ZUF6 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
LINC00336Q6ZUF6 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
LINC00336Q6ZUF6 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LINC00336Q6ZUF6 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LINC00336Q6ZUF6 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC18.06■□□□□ 0.48
LINC00336Q6ZUF6 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LINC00336Q6ZUF6 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LINC00336Q6ZUF6 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LINC00336Q6ZUF6 ABHD17AP3-201ENST00000503096 1137 ntBASIC18.05■□□□□ 0.48
LINC00336Q6ZUF6 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC18.05■□□□□ 0.48
LINC00336Q6ZUF6 DUX4L11-201ENST00000611504 1267 ntBASIC18.05■□□□□ 0.48
LINC00336Q6ZUF6 DUX4L12-201ENST00000614593 1267 ntBASIC18.05■□□□□ 0.48
LINC00336Q6ZUF6 DUX4L14-201ENST00000621227 1267 ntBASIC18.05■□□□□ 0.48
LINC00336Q6ZUF6 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC18.05■□□□□ 0.48
LINC00336Q6ZUF6 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms