Protein–RNA interactions for Protein: P61129

ZC3H6, Zinc finger CCCH domain-containing protein 6, humanhuman

Known RBP Predictions only

Length 1,189 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H6P61129 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC37.34■■■■□ 3.57
ZC3H6P61129 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC37.34■■■■□ 3.57
ZC3H6P61129 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC37.34■■■■□ 3.57
ZC3H6P61129 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC37.33■■■■□ 3.57
ZC3H6P61129 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC37.31■■■■□ 3.56
ZC3H6P61129 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC37.3■■■■□ 3.56
ZC3H6P61129 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC37.3■■■■□ 3.56
ZC3H6P61129 HGH1-207ENST00000628266 258 ntTSL 5 BASIC37.27■■■■□ 3.56
ZC3H6P61129 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC37.25■■■■□ 3.55
ZC3H6P61129 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC37.24■■■■□ 3.55
ZC3H6P61129 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC37.23■■■■□ 3.55
ZC3H6P61129 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC37.22■■■■□ 3.55
ZC3H6P61129 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC37.22■■■■□ 3.55
ZC3H6P61129 WASH5P-204ENST00000632292 975 ntBASIC37.22■■■■□ 3.55
ZC3H6P61129 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC37.21■■■■□ 3.55
ZC3H6P61129 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC37.21■■■■□ 3.55
ZC3H6P61129 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC37.2■■■■□ 3.55
ZC3H6P61129 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC37.19■■■■□ 3.54
ZC3H6P61129 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC37.17■■■■□ 3.54
ZC3H6P61129 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC37.17■■■■□ 3.54
ZC3H6P61129 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC37.17■■■■□ 3.54
ZC3H6P61129 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC37.16■■■■□ 3.54
ZC3H6P61129 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC37.15■■■■□ 3.54
ZC3H6P61129 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC37.14■■■■□ 3.54
ZC3H6P61129 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC37.13■■■■□ 3.54
ZC3H6P61129 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC37.13■■■■□ 3.53
ZC3H6P61129 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC37.11■■■■□ 3.53
ZC3H6P61129 RPS2-202ENST00000526522 924 ntTSL 2 BASIC37.11■■■■□ 3.53
ZC3H6P61129 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC37.1■■■■□ 3.53
ZC3H6P61129 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC37.09■■■■□ 3.53
ZC3H6P61129 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC37.09■■■■□ 3.53
ZC3H6P61129 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC37.07■■■■□ 3.52
ZC3H6P61129 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC37.07■■■■□ 3.52
ZC3H6P61129 RPS2-209ENST00000529806 993 ntTSL 3 BASIC37.07■■■■□ 3.52
ZC3H6P61129 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC37.06■■■■□ 3.52
ZC3H6P61129 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC37.04■■■■□ 3.52
ZC3H6P61129 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC37.03■■■■□ 3.52
ZC3H6P61129 DUX4L29-201ENST00000425409 679 ntBASIC37.03■■■■□ 3.52
ZC3H6P61129 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC37.03■■■■□ 3.52
ZC3H6P61129 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC37.02■■■■□ 3.52
ZC3H6P61129 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC37.02■■■■□ 3.52
ZC3H6P61129 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC37.01■■■■□ 3.52
ZC3H6P61129 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC37■■■■□ 3.51
ZC3H6P61129 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC36.98■■■■□ 3.51
ZC3H6P61129 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC36.97■■■■□ 3.51
ZC3H6P61129 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC36.97■■■■□ 3.51
ZC3H6P61129 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC36.97■■■■□ 3.51
ZC3H6P61129 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC36.97■■■■□ 3.51
ZC3H6P61129 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC36.95■■■■□ 3.5
ZC3H6P61129 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC36.94■■■■□ 3.5
ZC3H6P61129 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC36.94■■■■□ 3.5
ZC3H6P61129 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC36.93■■■■□ 3.5
ZC3H6P61129 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC36.93■■■■□ 3.5
ZC3H6P61129 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC36.93■■■■□ 3.5
ZC3H6P61129 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC36.93■■■■□ 3.5
ZC3H6P61129 AC021231.2-201ENST00000594613 730 ntBASIC36.92■■■■□ 3.5
ZC3H6P61129 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC36.9■■■■□ 3.5
ZC3H6P61129 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC36.89■■■■□ 3.5
ZC3H6P61129 MIR4449-201ENST00000578365 66 ntBASIC36.89■■■■□ 3.5
ZC3H6P61129 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC36.86■■■■□ 3.49
ZC3H6P61129 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC36.85■■■■□ 3.49
ZC3H6P61129 MIR639-201ENST00000384974 98 ntBASIC36.81■■■■□ 3.48
ZC3H6P61129 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC36.79■■■■□ 3.48
ZC3H6P61129 CIB2-204ENST00000557846 934 ntTSL 3 BASIC36.78■■■■□ 3.48
ZC3H6P61129 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC36.77■■■■□ 3.48
ZC3H6P61129 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC36.76■■■■□ 3.48
ZC3H6P61129 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC36.75■■■■□ 3.47
ZC3H6P61129 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC36.75■■■■□ 3.47
ZC3H6P61129 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC36.75■■■■□ 3.47
ZC3H6P61129 MACF1-219ENST00000484793 834 ntTSL 2 BASIC36.75■■■■□ 3.47
ZC3H6P61129 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC36.75■■■■□ 3.47
ZC3H6P61129 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC36.74■■■■□ 3.47
ZC3H6P61129 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC36.73■■■■□ 3.47
ZC3H6P61129 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC36.72■■■■□ 3.47
ZC3H6P61129 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC36.71■■■■□ 3.47
ZC3H6P61129 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC36.71■■■■□ 3.47
ZC3H6P61129 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC36.7■■■■□ 3.47
ZC3H6P61129 MIR6090-201ENST00000622481 60 ntBASIC36.7■■■■□ 3.47
ZC3H6P61129 RNF166-209ENST00000567844 633 ntTSL 5 BASIC36.69■■■■□ 3.46
ZC3H6P61129 AC016575.1-201ENST00000607026 382 ntBASIC36.69■■■■□ 3.46
ZC3H6P61129 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC36.67■■■■□ 3.46
ZC3H6P61129 MIR3648-2-201ENST00000581792 180 ntBASIC36.67■■■■□ 3.46
ZC3H6P61129 MIR3648-1-201ENST00000615959 180 ntBASIC36.67■■■■□ 3.46
ZC3H6P61129 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC36.66■■■■□ 3.46
ZC3H6P61129 GDI1-215ENST00000630693 786 ntTSL 4 BASIC36.65■■■■□ 3.46
ZC3H6P61129 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC36.65■■■■□ 3.46
ZC3H6P61129 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC36.63■■■■□ 3.45
ZC3H6P61129 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC36.62■■■■□ 3.45
ZC3H6P61129 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC36.6■■■■□ 3.45
ZC3H6P61129 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC36.6■■■■□ 3.45
ZC3H6P61129 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC36.6■■■■□ 3.45
ZC3H6P61129 AC108673.1-201ENST00000510422 1159 ntBASIC36.6■■■■□ 3.45
ZC3H6P61129 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC36.6■■■■□ 3.45
ZC3H6P61129 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC36.6■■■■□ 3.45
ZC3H6P61129 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC36.59■■■■□ 3.45
ZC3H6P61129 CALM3-209ENST00000597743 577 ntTSL 4 BASIC36.58■■■■□ 3.45
ZC3H6P61129 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC36.57■■■■□ 3.44
ZC3H6P61129 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC36.57■■■■□ 3.44
ZC3H6P61129 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC36.57■■■■□ 3.44
ZC3H6P61129 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC36.56■■■■□ 3.44
Retrieved 100 of 98,524 protein–RNA pairs in 457.4 ms