Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBE2AP49459 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC17.01■□□□□ 0.31
UBE2AP49459 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
UBE2AP49459 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
UBE2AP49459 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
UBE2AP49459 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC17■□□□□ 0.31
UBE2AP49459 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
UBE2AP49459 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
UBE2AP49459 AL031258.1-201ENST00000623562 325 ntBASIC16.99■□□□□ 0.31
UBE2AP49459 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
UBE2AP49459 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC16.98■□□□□ 0.31
UBE2AP49459 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC16.98■□□□□ 0.31
UBE2AP49459 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
UBE2AP49459 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
UBE2AP49459 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
UBE2AP49459 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
UBE2AP49459 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UBE2AP49459 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UBE2AP49459 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UBE2AP49459 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
UBE2AP49459 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
UBE2AP49459 AC120057.4-201ENST00000624722 1615 ntBASIC16.96■□□□□ 0.3
UBE2AP49459 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UBE2AP49459 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC16.95■□□□□ 0.3
UBE2AP49459 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
UBE2AP49459 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
UBE2AP49459 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
UBE2AP49459 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
UBE2AP49459 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC16.94■□□□□ 0.3
UBE2AP49459 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC16.93■□□□□ 0.3
UBE2AP49459 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC16.93■□□□□ 0.3
UBE2AP49459 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
UBE2AP49459 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC16.93■□□□□ 0.3
UBE2AP49459 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
UBE2AP49459 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
UBE2AP49459 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBE2AP49459 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC16.92■□□□□ 0.3
UBE2AP49459 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
UBE2AP49459 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBE2AP49459 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBE2AP49459 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC16.91■□□□□ 0.3
UBE2AP49459 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
UBE2AP49459 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
UBE2AP49459 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
UBE2AP49459 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
UBE2AP49459 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
UBE2AP49459 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
UBE2AP49459 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
UBE2AP49459 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
UBE2AP49459 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC16.87■□□□□ 0.29
UBE2AP49459 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
UBE2AP49459 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
UBE2AP49459 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
UBE2AP49459 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
UBE2AP49459 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
UBE2AP49459 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC16.85■□□□□ 0.29
UBE2AP49459 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
UBE2AP49459 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
UBE2AP49459 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC16.84■□□□□ 0.29
UBE2AP49459 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC16.84■□□□□ 0.29
UBE2AP49459 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
UBE2AP49459 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
UBE2AP49459 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
UBE2AP49459 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC16.82■□□□□ 0.28
UBE2AP49459 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC16.81■□□□□ 0.28
UBE2AP49459 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
UBE2AP49459 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
UBE2AP49459 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBE2AP49459 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBE2AP49459 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UBE2AP49459 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC16.8■□□□□ 0.28
UBE2AP49459 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
UBE2AP49459 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
UBE2AP49459 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
UBE2AP49459 AL161658.1-201ENST00000623641 1967 ntBASIC16.78■□□□□ 0.28
UBE2AP49459 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
UBE2AP49459 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC16.78■□□□□ 0.28
UBE2AP49459 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
UBE2AP49459 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
UBE2AP49459 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
UBE2AP49459 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC16.77■□□□□ 0.28
UBE2AP49459 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC16.77■□□□□ 0.28
UBE2AP49459 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC16.77■□□□□ 0.27
UBE2AP49459 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
UBE2AP49459 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
UBE2AP49459 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
UBE2AP49459 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC16.76■□□□□ 0.27
UBE2AP49459 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBE2AP49459 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
UBE2AP49459 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBE2AP49459 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
UBE2AP49459 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC16.73■□□□□ 0.27
UBE2AP49459 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
UBE2AP49459 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
UBE2AP49459 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
UBE2AP49459 KLF16-203ENST00000592313 508 ntTSL 3 BASIC16.72■□□□□ 0.27
UBE2AP49459 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
UBE2AP49459 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
UBE2AP49459 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
UBE2AP49459 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms