Protein–RNA interactions for Protein: P40227

CCT6A, T-complex protein 1 subunit zeta, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCT6AP40227 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
CCT6AP40227 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC30.69■■■□□ 2.5
CCT6AP40227 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC30.68■■■□□ 2.5
CCT6AP40227 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
CCT6AP40227 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
CCT6AP40227 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
CCT6AP40227 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC30.66■■■□□ 2.5
CCT6AP40227 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC30.66■■■□□ 2.5
CCT6AP40227 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
CCT6AP40227 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC30.64■■■□□ 2.5
CCT6AP40227 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC30.62■■■□□ 2.49
CCT6AP40227 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
CCT6AP40227 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
CCT6AP40227 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC30.6■■■□□ 2.49
CCT6AP40227 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC30.6■■■□□ 2.49
CCT6AP40227 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
CCT6AP40227 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
CCT6AP40227 AC097358.2-201ENST00000607541 1159 ntBASIC30.56■■■□□ 2.48
CCT6AP40227 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC30.55■■■□□ 2.48
CCT6AP40227 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
CCT6AP40227 AC136428.2-201ENST00000563187 214 ntBASIC30.54■■■□□ 2.48
CCT6AP40227 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC30.54■■■□□ 2.48
CCT6AP40227 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC30.53■■■□□ 2.48
CCT6AP40227 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC30.53■■■□□ 2.48
CCT6AP40227 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
CCT6AP40227 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC30.52■■■□□ 2.48
CCT6AP40227 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC30.52■■■□□ 2.48
CCT6AP40227 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC30.52■■■□□ 2.48
CCT6AP40227 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC30.5■■■□□ 2.47
CCT6AP40227 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
CCT6AP40227 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
CCT6AP40227 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
CCT6AP40227 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
CCT6AP40227 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC30.47■■■□□ 2.47
CCT6AP40227 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
CCT6AP40227 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
CCT6AP40227 WASH5P-204ENST00000632292 975 ntBASIC30.46■■■□□ 2.47
CCT6AP40227 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
CCT6AP40227 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
CCT6AP40227 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC30.42■■■□□ 2.46
CCT6AP40227 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
CCT6AP40227 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC30.39■■■□□ 2.46
CCT6AP40227 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC30.39■■■□□ 2.45
CCT6AP40227 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
CCT6AP40227 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC30.37■■■□□ 2.45
CCT6AP40227 CAHM-201ENST00000604200 896 ntBASIC30.37■■■□□ 2.45
CCT6AP40227 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
CCT6AP40227 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC30.35■■■□□ 2.45
CCT6AP40227 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
CCT6AP40227 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC30.35■■■□□ 2.45
CCT6AP40227 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC30.34■■■□□ 2.45
CCT6AP40227 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
CCT6AP40227 AL391121.1-201ENST00000607967 1349 ntBASIC30.34■■■□□ 2.45
CCT6AP40227 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC30.34■■■□□ 2.45
CCT6AP40227 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC30.34■■■□□ 2.45
CCT6AP40227 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
CCT6AP40227 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC30.32■■■□□ 2.44
CCT6AP40227 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
CCT6AP40227 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
CCT6AP40227 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
CCT6AP40227 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC30.29■■■□□ 2.44
CCT6AP40227 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC30.29■■■□□ 2.44
CCT6AP40227 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
CCT6AP40227 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
CCT6AP40227 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC30.28■■■□□ 2.44
CCT6AP40227 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.44
CCT6AP40227 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
CCT6AP40227 EBPL-202ENST00000378268 680 ntTSL 3 BASIC30.25■■■□□ 2.43
CCT6AP40227 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC30.23■■■□□ 2.43
CCT6AP40227 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
CCT6AP40227 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC30.22■■■□□ 2.43
CCT6AP40227 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC30.22■■■□□ 2.43
CCT6AP40227 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC30.21■■■□□ 2.43
CCT6AP40227 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC30.21■■■□□ 2.43
CCT6AP40227 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC30.21■■■□□ 2.43
CCT6AP40227 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC30.21■■■□□ 2.43
CCT6AP40227 AL161658.1-201ENST00000623641 1967 ntBASIC30.21■■■□□ 2.43
CCT6AP40227 SUZ12P1-203ENST00000578195 985 ntBASIC30.2■■■□□ 2.43
CCT6AP40227 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
CCT6AP40227 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
CCT6AP40227 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
CCT6AP40227 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
CCT6AP40227 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
CCT6AP40227 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC30.14■■■□□ 2.42
CCT6AP40227 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
CCT6AP40227 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC30.12■■■□□ 2.41
CCT6AP40227 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
CCT6AP40227 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
CCT6AP40227 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
CCT6AP40227 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC30.12■■■□□ 2.41
CCT6AP40227 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
CCT6AP40227 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC30.1■■■□□ 2.41
CCT6AP40227 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC30.1■■■□□ 2.41
CCT6AP40227 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
CCT6AP40227 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC30.07■■■□□ 2.4
CCT6AP40227 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
CCT6AP40227 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
CCT6AP40227 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC30.06■■■□□ 2.4
CCT6AP40227 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
CCT6AP40227 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms