Protein–RNA interactions for Protein: O00458

IFRD1, Interferon-related developmental regulator 1, humanhuman

Predicted RBP Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFRD1O00458 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
IFRD1O00458 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC26.75■■□□□ 1.87
IFRD1O00458 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
IFRD1O00458 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC26.75■■□□□ 1.87
IFRD1O00458 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
IFRD1O00458 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC26.74■■□□□ 1.87
IFRD1O00458 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC26.74■■□□□ 1.87
IFRD1O00458 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
IFRD1O00458 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC26.73■■□□□ 1.87
IFRD1O00458 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC26.73■■□□□ 1.87
IFRD1O00458 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
IFRD1O00458 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC26.7■■□□□ 1.86
IFRD1O00458 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
IFRD1O00458 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC26.69■■□□□ 1.86
IFRD1O00458 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
IFRD1O00458 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
IFRD1O00458 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC26.68■■□□□ 1.86
IFRD1O00458 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
IFRD1O00458 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
IFRD1O00458 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC26.68■■□□□ 1.86
IFRD1O00458 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC26.67■■□□□ 1.86
IFRD1O00458 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
IFRD1O00458 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
IFRD1O00458 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC26.66■■□□□ 1.86
IFRD1O00458 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC26.65■■□□□ 1.86
IFRD1O00458 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC26.65■■□□□ 1.86
IFRD1O00458 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
IFRD1O00458 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
IFRD1O00458 AC120057.4-201ENST00000624722 1615 ntBASIC26.64■■□□□ 1.85
IFRD1O00458 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
IFRD1O00458 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
IFRD1O00458 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC26.63■■□□□ 1.85
IFRD1O00458 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC26.63■■□□□ 1.85
IFRD1O00458 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC26.61■■□□□ 1.85
IFRD1O00458 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC26.59■■□□□ 1.85
IFRD1O00458 AL391121.1-201ENST00000607967 1349 ntBASIC26.59■■□□□ 1.85
IFRD1O00458 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
IFRD1O00458 CAHM-201ENST00000604200 896 ntBASIC26.58■■□□□ 1.85
IFRD1O00458 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
IFRD1O00458 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
IFRD1O00458 WASH5P-204ENST00000632292 975 ntBASIC26.57■■□□□ 1.84
IFRD1O00458 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
IFRD1O00458 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC26.56■■□□□ 1.84
IFRD1O00458 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
IFRD1O00458 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
IFRD1O00458 EBPL-202ENST00000378268 680 ntTSL 3 BASIC26.53■■□□□ 1.84
IFRD1O00458 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
IFRD1O00458 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC26.52■■□□□ 1.84
IFRD1O00458 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
IFRD1O00458 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC26.52■■□□□ 1.84
IFRD1O00458 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
IFRD1O00458 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
IFRD1O00458 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC26.5■■□□□ 1.83
IFRD1O00458 SUZ12P1-203ENST00000578195 985 ntBASIC26.5■■□□□ 1.83
IFRD1O00458 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC26.5■■□□□ 1.83
IFRD1O00458 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
IFRD1O00458 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
IFRD1O00458 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC26.49■■□□□ 1.83
IFRD1O00458 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
IFRD1O00458 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC26.49■■□□□ 1.83
IFRD1O00458 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
IFRD1O00458 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC26.47■■□□□ 1.83
IFRD1O00458 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC26.47■■□□□ 1.83
IFRD1O00458 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
IFRD1O00458 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
IFRD1O00458 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC26.44■■□□□ 1.82
IFRD1O00458 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
IFRD1O00458 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
IFRD1O00458 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC26.43■■□□□ 1.82
IFRD1O00458 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC26.43■■□□□ 1.82
IFRD1O00458 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
IFRD1O00458 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
IFRD1O00458 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
IFRD1O00458 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC26.4■■□□□ 1.82
IFRD1O00458 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.82
IFRD1O00458 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
IFRD1O00458 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
IFRD1O00458 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
IFRD1O00458 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
IFRD1O00458 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
IFRD1O00458 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.81
IFRD1O00458 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
IFRD1O00458 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
IFRD1O00458 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
IFRD1O00458 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
IFRD1O00458 DENR-202ENST00000455982 1052 ntTSL 5 BASIC26.31■■□□□ 1.8
IFRD1O00458 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
IFRD1O00458 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
IFRD1O00458 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC26.28■■□□□ 1.8
IFRD1O00458 HNRNPLP2-201ENST00000568980 1570 ntBASIC26.27■■□□□ 1.8
IFRD1O00458 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
IFRD1O00458 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC26.26■■□□□ 1.79
IFRD1O00458 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC26.26■■□□□ 1.79
IFRD1O00458 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
IFRD1O00458 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
IFRD1O00458 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC26.24■■□□□ 1.79
IFRD1O00458 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
IFRD1O00458 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
IFRD1O00458 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
IFRD1O00458 MIR762-201ENST00000390236 83 ntBASIC26.22■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 128 ms