Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC26.96■■□□□ 1.91
CCDC189A1A4V9 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC26.95■■□□□ 1.91
CCDC189A1A4V9 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC26.95■■□□□ 1.9
CCDC189A1A4V9 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC26.94■■□□□ 1.9
CCDC189A1A4V9 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
CCDC189A1A4V9 AL031258.1-201ENST00000623562 325 ntBASIC26.93■■□□□ 1.9
CCDC189A1A4V9 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC26.93■■□□□ 1.9
CCDC189A1A4V9 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC26.92■■□□□ 1.9
CCDC189A1A4V9 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
CCDC189A1A4V9 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
CCDC189A1A4V9 AP002365.1-201ENST00000603448 772 ntBASIC26.9■■□□□ 1.9
CCDC189A1A4V9 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CCDC189A1A4V9 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC26.89■■□□□ 1.9
CCDC189A1A4V9 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC26.89■■□□□ 1.9
CCDC189A1A4V9 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
CCDC189A1A4V9 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
CCDC189A1A4V9 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
CCDC189A1A4V9 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
CCDC189A1A4V9 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
CCDC189A1A4V9 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC26.86■■□□□ 1.89
CCDC189A1A4V9 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC26.84■■□□□ 1.89
CCDC189A1A4V9 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC26.84■■□□□ 1.89
CCDC189A1A4V9 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC26.83■■□□□ 1.89
CCDC189A1A4V9 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC26.83■■□□□ 1.89
CCDC189A1A4V9 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
CCDC189A1A4V9 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
CCDC189A1A4V9 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
CCDC189A1A4V9 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC26.82■■□□□ 1.88
CCDC189A1A4V9 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
CCDC189A1A4V9 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
CCDC189A1A4V9 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CCDC189A1A4V9 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
CCDC189A1A4V9 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
CCDC189A1A4V9 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
CCDC189A1A4V9 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
CCDC189A1A4V9 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC26.76■■□□□ 1.88
CCDC189A1A4V9 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC26.76■■□□□ 1.88
CCDC189A1A4V9 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
CCDC189A1A4V9 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
CCDC189A1A4V9 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC26.75■■□□□ 1.87
CCDC189A1A4V9 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
CCDC189A1A4V9 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC26.74■■□□□ 1.87
CCDC189A1A4V9 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC26.73■■□□□ 1.87
CCDC189A1A4V9 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
CCDC189A1A4V9 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC26.72■■□□□ 1.87
CCDC189A1A4V9 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
CCDC189A1A4V9 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC26.71■■□□□ 1.87
CCDC189A1A4V9 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
CCDC189A1A4V9 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
CCDC189A1A4V9 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC26.69■■□□□ 1.86
CCDC189A1A4V9 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
CCDC189A1A4V9 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
CCDC189A1A4V9 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
CCDC189A1A4V9 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
CCDC189A1A4V9 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC26.66■■□□□ 1.86
CCDC189A1A4V9 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CCDC189A1A4V9 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CCDC189A1A4V9 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CCDC189A1A4V9 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
CCDC189A1A4V9 ABCB10P1-201ENST00000614297 2181 ntBASIC26.63■■□□□ 1.85
CCDC189A1A4V9 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CCDC189A1A4V9 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC26.63■■□□□ 1.85
CCDC189A1A4V9 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CCDC189A1A4V9 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC26.61■■□□□ 1.85
CCDC189A1A4V9 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC26.6■■□□□ 1.85
CCDC189A1A4V9 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
CCDC189A1A4V9 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC26.6■■□□□ 1.85
CCDC189A1A4V9 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC26.6■■□□□ 1.85
CCDC189A1A4V9 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
CCDC189A1A4V9 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC26.58■■□□□ 1.85
CCDC189A1A4V9 SHF-206ENST00000560471 2499 ntTSL 5 BASIC26.58■■□□□ 1.85
CCDC189A1A4V9 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
CCDC189A1A4V9 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC26.57■■□□□ 1.84
CCDC189A1A4V9 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC26.57■■□□□ 1.84
CCDC189A1A4V9 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
CCDC189A1A4V9 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC26.55■■□□□ 1.84
CCDC189A1A4V9 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
CCDC189A1A4V9 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CCDC189A1A4V9 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
CCDC189A1A4V9 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC26.51■■□□□ 1.83
CCDC189A1A4V9 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC26.51■■□□□ 1.83
CCDC189A1A4V9 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
CCDC189A1A4V9 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC26.51■■□□□ 1.83
CCDC189A1A4V9 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC26.5■■□□□ 1.83
CCDC189A1A4V9 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC26.5■■□□□ 1.83
CCDC189A1A4V9 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC26.5■■□□□ 1.83
CCDC189A1A4V9 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC26.5■■□□□ 1.83
CCDC189A1A4V9 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC26.5■■□□□ 1.83
CCDC189A1A4V9 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
CCDC189A1A4V9 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
CCDC189A1A4V9 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
CCDC189A1A4V9 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC26.45■■□□□ 1.82
CCDC189A1A4V9 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC26.45■■□□□ 1.82
CCDC189A1A4V9 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC26.45■■□□□ 1.82
CCDC189A1A4V9 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
CCDC189A1A4V9 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
CCDC189A1A4V9 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
CCDC189A1A4V9 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC26.42■■□□□ 1.82
CCDC189A1A4V9 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC26.42■■□□□ 1.82
CCDC189A1A4V9 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC26.42■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms