Protein–RNA interactions for Protein: A0A0C4DH27

TRGV8, T-cell receptor gamma variable 8 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV8A0A0C4DH27 BOD1-206ENST00000480951 814 ntTSL 2 BASIC24.57■■□□□ 1.52
TRGV8A0A0C4DH27 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC24.56■■□□□ 1.52
TRGV8A0A0C4DH27 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
TRGV8A0A0C4DH27 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC24.54■■□□□ 1.52
TRGV8A0A0C4DH27 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC24.54■■□□□ 1.52
TRGV8A0A0C4DH27 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
TRGV8A0A0C4DH27 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC24.52■■□□□ 1.52
TRGV8A0A0C4DH27 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
TRGV8A0A0C4DH27 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
TRGV8A0A0C4DH27 ZNRF2P2-203ENST00000454624 420 ntBASIC24.5■■□□□ 1.51
TRGV8A0A0C4DH27 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC24.49■■□□□ 1.51
TRGV8A0A0C4DH27 WASH5P-204ENST00000632292 975 ntBASIC24.49■■□□□ 1.51
TRGV8A0A0C4DH27 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC24.48■■□□□ 1.51
TRGV8A0A0C4DH27 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
TRGV8A0A0C4DH27 RPS2-209ENST00000529806 993 ntTSL 3 BASIC24.46■■□□□ 1.51
TRGV8A0A0C4DH27 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC24.43■■□□□ 1.5
TRGV8A0A0C4DH27 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
TRGV8A0A0C4DH27 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
TRGV8A0A0C4DH27 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
TRGV8A0A0C4DH27 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
TRGV8A0A0C4DH27 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
TRGV8A0A0C4DH27 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
TRGV8A0A0C4DH27 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
TRGV8A0A0C4DH27 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
TRGV8A0A0C4DH27 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC24.39■■□□□ 1.49
TRGV8A0A0C4DH27 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
TRGV8A0A0C4DH27 HGH1-207ENST00000628266 258 ntTSL 5 BASIC24.39■■□□□ 1.49
TRGV8A0A0C4DH27 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
TRGV8A0A0C4DH27 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
TRGV8A0A0C4DH27 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
TRGV8A0A0C4DH27 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC24.35■■□□□ 1.49
TRGV8A0A0C4DH27 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
TRGV8A0A0C4DH27 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC24.35■■□□□ 1.49
TRGV8A0A0C4DH27 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
TRGV8A0A0C4DH27 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
TRGV8A0A0C4DH27 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
TRGV8A0A0C4DH27 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
TRGV8A0A0C4DH27 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
TRGV8A0A0C4DH27 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC24.33■■□□□ 1.49
TRGV8A0A0C4DH27 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
TRGV8A0A0C4DH27 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
TRGV8A0A0C4DH27 DUX4L29-201ENST00000425409 679 ntBASIC24.33■■□□□ 1.49
TRGV8A0A0C4DH27 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.48
TRGV8A0A0C4DH27 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
TRGV8A0A0C4DH27 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
TRGV8A0A0C4DH27 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC24.32■■□□□ 1.48
TRGV8A0A0C4DH27 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC24.32■■□□□ 1.48
TRGV8A0A0C4DH27 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
TRGV8A0A0C4DH27 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
TRGV8A0A0C4DH27 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
TRGV8A0A0C4DH27 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
TRGV8A0A0C4DH27 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
TRGV8A0A0C4DH27 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC24.3■■□□□ 1.48
TRGV8A0A0C4DH27 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
TRGV8A0A0C4DH27 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
TRGV8A0A0C4DH27 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
TRGV8A0A0C4DH27 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC24.26■■□□□ 1.47
TRGV8A0A0C4DH27 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
TRGV8A0A0C4DH27 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
TRGV8A0A0C4DH27 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
TRGV8A0A0C4DH27 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
TRGV8A0A0C4DH27 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
TRGV8A0A0C4DH27 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC24.23■■□□□ 1.47
TRGV8A0A0C4DH27 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
TRGV8A0A0C4DH27 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC24.22■■□□□ 1.47
TRGV8A0A0C4DH27 CIB2-204ENST00000557846 934 ntTSL 3 BASIC24.22■■□□□ 1.47
TRGV8A0A0C4DH27 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
TRGV8A0A0C4DH27 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
TRGV8A0A0C4DH27 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC24.21■■□□□ 1.47
TRGV8A0A0C4DH27 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
TRGV8A0A0C4DH27 AC021231.2-201ENST00000594613 730 ntBASIC24.2■■□□□ 1.46
TRGV8A0A0C4DH27 RPS2-202ENST00000526522 924 ntTSL 2 BASIC24.18■■□□□ 1.46
TRGV8A0A0C4DH27 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
TRGV8A0A0C4DH27 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
TRGV8A0A0C4DH27 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC24.17■■□□□ 1.46
TRGV8A0A0C4DH27 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
TRGV8A0A0C4DH27 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC24.15■■□□□ 1.46
TRGV8A0A0C4DH27 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
TRGV8A0A0C4DH27 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC24.13■■□□□ 1.45
TRGV8A0A0C4DH27 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC24.13■■□□□ 1.45
TRGV8A0A0C4DH27 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
TRGV8A0A0C4DH27 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
TRGV8A0A0C4DH27 AC108673.1-201ENST00000510422 1159 ntBASIC24.11■■□□□ 1.45
TRGV8A0A0C4DH27 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
TRGV8A0A0C4DH27 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
TRGV8A0A0C4DH27 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC24.1■■□□□ 1.45
TRGV8A0A0C4DH27 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
TRGV8A0A0C4DH27 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
TRGV8A0A0C4DH27 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
TRGV8A0A0C4DH27 MIR4449-201ENST00000578365 66 ntBASIC24.08■■□□□ 1.45
TRGV8A0A0C4DH27 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
TRGV8A0A0C4DH27 MIR639-201ENST00000384974 98 ntBASIC24.07■■□□□ 1.44
TRGV8A0A0C4DH27 MACF1-219ENST00000484793 834 ntTSL 2 BASIC24.07■■□□□ 1.44
TRGV8A0A0C4DH27 RNF166-209ENST00000567844 633 ntTSL 5 BASIC24.07■■□□□ 1.44
TRGV8A0A0C4DH27 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
TRGV8A0A0C4DH27 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
TRGV8A0A0C4DH27 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC24.05■■□□□ 1.44
TRGV8A0A0C4DH27 MIR6090-201ENST00000622481 60 ntBASIC24.05■■□□□ 1.44
TRGV8A0A0C4DH27 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC24.04■■□□□ 1.44
TRGV8A0A0C4DH27 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC24.04■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms